Template-based Modeling Results for ERFK_ECOLI

Submitted Primary Sequence

>Length 310
MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF
CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEECCEECCCCCCCCEEEEECCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCHHHEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF
4411010000000000210100102123332422221110202333231031001211101110131122232111322220100221223322320000112321000022321000000000132223123220000212221121211231121013213212211211231110000010010000000112221113102000202120022003103210201002220201123301000100211343323232333121212310211132331213202100243221001010224434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF
1	MUSTER	1y7mA	0.344	0.516	1.390	threading_1	-------------------------------------LTYQVKQGD--TLNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPG-LPDPYTIPYHIAVSIGAKTLTLSL--NNRVKTYPIAVGKILTQTPTG-EFYIINRQRNP---------------------------GGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIRH-NKDVIELASIVPNGTRVTINR------------------------------------------------------------------------------
2	PROSPECT2	1sezA1	0.073	0.968	1.589	threading_2	AKRVAVIVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGESEGDVTFLIDSLGL-REKQQFPLSQNKRYIARNGTPVLLPSKTSANKKRQRGSFSFLGGQTLTLRLNSRVLELSCS----CTEDSAIDSWSIISASPHKRQSEEESFDAVITAPLCDVKSKIAKRGNPFLLNFIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQH-----GLKTLGTLFSSFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPNYDSVLDAIDKEKNLPGLFYAGNESVS
3	SPARKS	1y7ma	0.338	0.516	3.265	threading_3	-------------------------------------LTYQVKQGD--TLNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPG-LPDPYTIPYHIAVSIGAKTLTLSLNN--RVKTYPIAVGKILTQTPTG-EFYIINRQRNP---------------------------GGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIRH-NKDVIELASIVPNGTRVTINR------------------------------------------------------------------------------
4	PROSPECT2	1zatA	0.199	0.665	2.181	threading_4	KEQLASMNAIANVKATYSINGETFQIPTSTNDTSTKRGEVTVPVGTYSWTIQTDSETEALKKAILAGQD------FTRSPIVQGGTTADHPLIEDTYIEVDLENQHMWYYK-DGKVALETDIVSGKPTTPTP-AGVFYVWNKEEDATLKGTN-----------------GTPYESPVNYWMPIDWTGVGIHDSDWQPEYGGDGSHGCINTPPSVMKELFGMVEKGTPVLV-------------------------------------------------------------------------------F
5	PPA-I	1y7mA	0.338	0.516	1.873	threading_5	-------------------------------------LTYQVKQGD--TLNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPG-LPDPYTIPYHIAVSIGAKTLTLSLNN--RVKTYPIAVGKILTQTPTG-EFYIINRQRNPGG---------------------------PFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIRH-NKDVIELASIVPNGTRVTINR------------------------------------------------------------------------------
6	HHPRED-l	1y7m_A	0.331	0.516	8.163	threading_6	-------------------------------------LTYQVKQGDT--LNSIAADFRISTAALLQANPSLQAG-LTAGQSIVIPGLP-DPYTIPYHIAVSIGAKTLTLS-LNNRV-KTYPIAVGKILTQTPTGEFYIINR-QR---------------------------NPGGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIR-HNKDVIELASIVPNGTRVTINR------------------------------------------------------------------------------
7	HHPRED-g	1y7m_A	0.338	0.516	7.026	threading_7	-------------------------------------LTYQVKQGDT--LNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPG-LPDPYTIPYHIAVSIGAKTLTLSLNN-RV-KTYPIAVGKILTQTP-TGEFYIINRQRN---------------------------PGGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIR-HNKDVIELASIVPNGTRVTINR------------------------------------------------------------------------------
8	SP3	1y7ma	0.344	0.516	3.190	threading_8	-------------------------------------LTYQVKQGD--TLNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPG-LPDPYTIPYHIAVSIGAKTLTLSL--NNRVKTYPIAVGKILTQTPTGEFY-IINRQRNP---------------------------GGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIRH-NKDVIELASIVPNGTRVTINR------------------------------------------------------------------------------
9	SAM-T99	1y7mA	0.329	0.510	5.404	threading_9	-------------------------------------LTYQVKQGD--TLNSIAADFRISTAALLQANPSLQAGLTAGQSIVIPGLPD--PYTIPYHIAVSIGAKTLTL--SLNNRVKTYPIAVGKILTQTPT-GEFYIINRQRNPGG---------------------------PFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIR-HNKDVIELASIVPNGTRVTI--------------------------------------------------------------------------------
10	MUSTER	1zatA	0.218	0.652	0.935	threading_10	IPSSDIMSWTEQVRQYVTDLGTKYNTSTNDTKFSTKRGEVTVPVGTYSQTDSETEAL---KKAILAGQDFTRSPIVQGGTT------ADHPLIEDTYIEVDLENQHMWYYK-DGKVALETDIVSGKPTTPTPAG-VFYVWNKEEDATLKGTNG-----------------TPYESPVN-YWMPIDTGVGIHDSDWQPEYGGRGSHGCINTPPSVMKELFGMVEKGTPVLVF-------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.738 to 1y7mA SCOP code=b.160.1.1	TM-score=0.546 to 1d5tA SCOP code=c.3.1.3	TM-score=0.741 to 1y7mA SCOP code=b.160.1.1	TM-score=0.742 to 1y7mA SCOP code=b.160.1.1	TM-score=0.665 to 1zatA SCOP code=b.160.1.1