Template-based Modeling Results for EPTA_ECOLI

Submitted Primary Sequence

>Length 547
MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDSLHNVLVFLSMPVVAFSVINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDRSMIANIIDTTPAESYALMTPQMLLTLGFSGVLAALIACWIKIKPATSRLRSVLFRGANILVSVLLILLVAALFYKDYASLFRNNKELVKSLSPSNSIVASWSWYSHQRLANLPLVRIGEDAHRNPLMQNEKRKNLTILIVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTASCGTATAVSVPCMFSDMPREHYKEELAQHQEGVLDIIQRAGINVLWNDNDGGCKGACDRVPHQNVTALNLPDQCINGECYDEVLFHGLEEYINNLQGDGVIVLHTIGSHGPTYYNRYPPQFRKFTPTCDTNEIQTCTKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSLVYLSDHGESLGENGIYLHGLPYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQTQHYSQDNLFSTLLGLTGVETKYYQAADDILQTCRRVSE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDSLHNVLVFLSMPVVAFSVINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDRSMIANIIDTTPAESYALMTPQMLLTLGFSGVLAALIACWIKIKPATSRLRSVLFRGANILVSVLLILLVAALFYKDYASLFRNNKELVKSLSPSNSIVASWSWYSHQRLANLPLVRIGEDAHRNPLMQNEKRKNLTILIVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTASCGTATAVSVPCMFSDMPREHYKEELAQHQEGVLDIIQRAGINVLWNDNDGGCKGACDRVPHQNVTALNLPDQCINGECYDEVLFHGLEEYINNLQGDGVIVLHTIGSHGPTYYNRYPPQFRKFTPTCDTNEIQTCTKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSLVYLSDHGESLGENGIYLHGLPYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQTQHYSQDNLFSTLLGLTGVETKYYQAADDILQTCRRVSE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCHHHCCCCCEEEECEEECCCCCCCHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHCCCCCCCCCCCCCCCCCHHCEECCEEEEECHHHHHHCHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDSLHNVLVFLSMPVVAFSVINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDRSMIANIIDTTPAESYALMTPQMLLTLGFSGVLAALIACWIKIKPATSRLRSVLFRGANILVSVLLILLVAALFYKDYASLFRNNKELVKSLSPSNSIVASWSWYSHQRLANLPLVRIGEDAHRNPLMQNEKRKNLTILIVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTASCGTATAVSVPCMFSDMPREHYKEELAQHQEGVLDIIQRAGINVLWNDNDGGCKGACDRVPHQNVTALNLPDQCINGECYDEVLFHGLEEYINNLQGDGVIVLHTIGSHGPTYYNRYPPQFRKFTPTCDTNEIQTCTKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSLVYLSDHGESLGENGIYLHGLPYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQTQHYSQDNLFSTLLGLTGVETKYYQAADDILQTCRRVSE
5332224422021100000000000000000002100310223212100000000000000000000000011001000000000000000001101010011000101211121012001110000000000000000000202222230210012000000000000000010021001013213300221000100000001001122231111200210121221334444200000001112121010211223112301433000010000101010200201103122331332112223000200230101000001111031102212221011221233122131112200200221132232310000001012122113211321231222132332321222100100000010001002200200342433210000000110220132111221112210132112000000003311331321130113213332000010000000001030321322211132134234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDSLHNVLVFLSMPVVAFSVINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDRSMIANIIDTTPAESYALMTPQMLLTLGFSGVLAALIACWIKIKPATSRLRSVLFRGANILVSVLLILLVAALFYKDYASLFRNNKELVKSLSPSNSIVASWSWYSHQRLANLPLVRIGEDAHRNPLMQNEKRKNLTILIVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTASCGTATAVSVPCMFSDMPREHYKEELAQHQEGVLDIIQRAGINVLWNDNDGGCKGACDRVPHQNVTALNLPDQCINGECYDEVLFHGLEEYINNLQGDGVIVLHTIGSHGPTYYNRYPPQFRKFTPTCDTNEIQTCTKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSLVYLSDHGESLGENGIYLHGLPYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQTQHYSQDNLFSTLLGLTGVETKYYQAADDILQTCRRVSE
1	PROSPECT2	1w36B1	0.088	0.931	1.810	threading_1	MGGSAAFPRPLTVEELLVVATAELRGRIRSNIHELRIACLRETTDNPLYERLLEEIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGIEDESLLRYQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDIRDLVITRALAEIRETVAREKRRRGGFDDMLSRLDSALRSESGEVLAAAIRTRFPEFQDTDPQQYRIFRRIWHHQPETALLLIGD----PKQAIYAFRGADMKARSEVHAHYTLDTNWRSAPGMVNSAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGESCGVGAAQIRDWLQAGQRGEALLMNGDVRSRQEAAQVRDALTLLEKHLVQIVTIHKSKGLETNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEDLRLLYVAL-----TRSVWHCSLGVAPLVRRRGDKKGD-----------------------------TDVHQSALGRLLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQVND
2	PROSPECT2	1qgra	0.093	1.000	1.780	threading_2	MLEKTVSPDRAAVENLPTFLVELSRVLANQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLHTLSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLAALQNLVKIMSLYYQYMETYITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKALPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWASSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQLRKVQHQDALQISDVVMAYMEAFKPFLGIGLKNYAEYQLAAVGLVGDLCRALQSNIIPFNLGNENVHRSVKPQILSVFAIGGEFKKYLEVVLNTLQQASQAQVDKSDEAYTGIVQGLKGDQENVHPDVMLVDEDHTNQA
3	SPARKS	2w8da	0.159	0.576	2.505	threading_3	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSSDVTEVENYKANYDVPNNVYFGKAEGKNVIYVSLESLQSFIIDYKIDGKEVTPFLNDNETFYFDNFFHQTGQGKSDAEFENSLYPLAQGSVFVNKAQQSVPAILKSKNYTSATFHGNTQTFWNRNEYKAEGISAYYDNEENTKNYGKDKPFFKESPL-LESLPQPFYTKFITLSNHFP------------FGDEGDTDFPAGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDGLYDKSIIVYGDHYGISENHNKVLGKDEITDYDNAQLQRVPLFIHAAG------------VKGEKVHKYAGDVDVAPTILHLLGVDTKDYLSGSDILSKEHREVI
4	PROSPECT2	1w63A	0.069	0.874	1.763	threading_4	MIRSSFREEDNTYRCRNVAKLLYMHMFTDKRIGYLGAMLLLDERQDVHLLMTNCIFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKA-----ALCAVHVIRKVPELMEMFLPALHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVTSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTV--------QTDHNAVQRHRSTIVDCLKDLDVSRRAMELSFALVNGNNIRGMMKE----LLYFLDSCEPEF------------------KADCASGIFLAAEKYAPSKRWHIDTIMRVLTT----------------------------------AGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDKYDHMRSALLERMPVMEK
5	PPA-I	2w8dB	0.157	0.572	1.341	threading_5	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADSSDVTEVENYKANYDVPNNVAEGKNVIYVSLESLQSFIIDYKIDGKEVTPFLNDNETFYFDNFFHQTGQGAEFENSLYPLAQGSVFVNKAQNTLQSVPAILKSKNYTSATFHGNTQTFWNRNEYKAEGIDKFFDSAYYDNEENTKDKPFFKESPLLESLPQPFYTKFITLSNHFP------------FGDEGDTDFPAGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDGLYDKSIIVYGDHYGISENHNKAAKVLGKDEITDAQLQRVPLFIHAAG------------VKGEKVHKYAGDVDVAPTILHLLGVDTKDYLSGSDILSKEHREVI
6	HHPRED-l	2vqr_A	0.142	0.541	4.280	threading_6	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKNVLLIVVDQWRADFVPHVLRDFLKTPNLDRLEGVTFRNHVTTCVP-GPARASLLTGLYLMNHRAVLDQRHLNLGKALRGVGYDPALIGYTTTVPGFHPVGAFEGYFGWAQNGFIPKEFSDSTFFTERALTYLKGRGKPFFLHLGYYRPHPPFVA--SAPYHAMYRPEDMPATLDEAELRQMRATYCGLITEVDDCLGRVFSYLDETGQWDDTLIIFTSDHGEQLGDHHLLGKIG----YNDPSFRIPLVIKDAGENAR---------AGAIESGFTESIDVMPTILDWLGGKIPHACDGLSLLPFLSEGR-
7	PROSPECT2	1qsaa	0.065	0.905	1.759	threading_7	GLLAFSPEKPGTTEAQCNYYYAKWAWQGAKELWDKLFSVWRASGKQDPLAYLERIRLAMTGLVTVLAGQMPADYQTIASAIISLANNPNTVLTFARTTGATDFTFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAITSLIERRVRMALGTGDRRGLN---TWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLM----QQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSKSKTEQAQ-----LARYAFNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSPVGASG-LMQIMPGTATHTVKMFSIPGYSS----------PGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRV-----------------------------RTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSAEWGRRY
8	HHPRED-g	3ed4_A	0.110	0.550	3.731	threading_8	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QPN-LVIIMADDLGYGDLATYGHQIVKTPNIDRLEGVKFTDYYAPAPLSSPSRAGLLTGRMPFRIPVALGRNELTIANLLKAQGYDTAMMGLNAGGDRTDQPQAQDLTWLRNGQPTPRADKMSGEYVSSEVVNWLDNKKKPFFLYVAFTEVHSPKYLDMYSQYMSAYQKQHPDLFYGDWADWRGVGEYYANISYLDAQVGKVLDKIKAMGEEDNTIVIFTSDNGPVTREADGLRGRK--DNLWEGGIRVPAIIKYGKHLPQG----------MVSDTPVYGLDWMPTLAKMMNFKLPTDFDGESLVPVLEQKAL
9	SP3	2yl4a	0.112	0.868	1.372	threading_9	EARKLLGYPERRRLAAAVGFLTMSSVISAPFFLGKIIDVIPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQRIVNRLRTSLFSSILRQEVKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFV------SPNLATFVLSVVPPVSIIAVIYGRYLRKLTKVTQ--DSLAQATQLAEERIGNVRTVRKEMTEIEKYASKVDHVMQLAR----KEAFARAGFFG-ATGLSGNLIVLK----GGLLMGSAHM------TVGELSSFLMYAFWVGI-------SIGGLSSFYSELMKGLGGRLWLLEREPKLPFNEGVIL--------NEKSFQGAARPEVPIFQDFS--LSIPSGSVTALVGPSGS-GKSLLLRL------YDPASDGHDIRQLNPVWLVSSIAENIAYSSVTAEEIQRVAEVAN-AVA----FIRNQGFNVGEKGVLLSGG------QKQ-RIPKILLLDEATAENEYLVQEALDRLMDGRRLSTIKNANMVAVLDQTEYGKHEE-------------
10	SP3	2w8da	0.168	0.576	1.718	threading_10	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSSDVTEVENYKANYDVPNN-------------VYFGKAEGKNVIYVSLESLQSFIIDYKIDGKEVTPFLNKNETFYFDNFFHQTGQGKSDAEFENSLYPLAQGSVFVNKAQNTVPAILKSKNYTSATFHGNTQNEYKAEGIDKFFDSAYYDNEENTKNYGKDKPFFKESPL-LESLPQPFYTKFITLSNHFP------------FGDEGDTDFPAGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDGLYDKSIIVYGDHYGISHNKAAKVLGKDEITDYDNAQQRVPLFIHAAG------------VKGEKVHKYAGDVDVAPTILHLLGVDTKDYLSGSDILSKEHREVI

Predicted Tertiary Structure


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TM-score=0.543 to 1o98A SCOP code=c.105.1.1	TM-score=0.576 to 1w36E SCOP code=c.37.1.19	TM-score=0.542 to 1qgkA SCOP code=a.118.1.1	TM-score=0.539 to 1o98A SCOP code=c.105.1.1	TM-score=0.679 to 1w63C SCOP code=i.23.1.1