Template-based Modeling Results for EMRA_ECOLI

Submitted Primary Sequence

>Length 390
MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFLVLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRIISPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITTDIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTAREISLAPVNKLIDDIVKANAG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFLVLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRIISPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITTDIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTAREISLAPVNKLIDDIVKANAG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEEEEEECCCCEEEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEECCCCCEECCCCEEEEEECCCCEEEEEEECHHHHCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFLVLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRIISPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITTDIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTAREISLAPVNKLIDDIVKANAG
553323332333224432443310000000000000000000011122022021010101102000311010120103222202311000101222022002302211110132022111102212110221211112022112122211424211331022023102102211210132121222232223221221022001102200110320201021201001110230110132100000011220101010311102203212202010001143120101010012122121110222222221021011010101013432332202100001010012333232112323222101010123222201310220042325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFLVLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRIISPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITTDIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTAREISLAPVNKLIDDIVKANAG
1	MUSTER	3fppB	0.197	0.664	1.642	threading_1	----------------------------------------------RDLQQSVLAKLDALKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVID--------------PEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYT------------------RIVAPMAGEVTQITTLQGQTVIAAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTR-YEGQIKDVLPT---------PEKVND-----AIFYYARFEVPNPN---GLLRLDMTAQVHIQLTDVKNVLT-----------------------------------
2	SPARKS	3fppa	0.192	0.669	3.972	threading_2	--------------------------------------------PGDLQQSVLTGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME--------------LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKR------------------NQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTR-YEGQIKDVLPT---------PEKVNDA-----IFYYARFEVPNPN---GLLRLDMTAQVHIQLTDVKNVLT-----------------------------------
3	PROSPECT2	3fppA	0.191	0.672	3.230	threading_3	PGDLQQ-------------------------------------------SVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLM--------------ELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQ------------------IKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTR-YEGQIKDVLPT---------PEKVNDAI-----FYYARFEVPNPN---GLLRLDMTAQVHIQLTDVKNVL-----------------------------------T
4	PPA-I	3fppB	0.191	0.672	2.528	threading_4	-------------------------------------------RPGDLQQSVLAKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVID--------------PEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYT------------------RIVAPMAGEVTQITTLQGQTVIAAQNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTR-YEGQIKDVLPT---------PEKVND-----AIFYYARFEVPNPN---GLLRLDMTAQVHIQLTDVKNVLT-----------------------------------
5	HHPRED-l	3fpp_A	0.185	0.667	4.753	threading_5	--------------------------------------------PGDLQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQ--------------QAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGT------------------IDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLT-RYEGQIKDVLPTPEKVND--------------AIFYYARFEVPNPNG---LLRLDMTAQVHIQLTDKNVLT------------------------------------
6	HHPRED-g	3fpp_A	0.207	0.669	4.198	threading_6	-------------------------------------PGDLQQS------VLATGKLDLRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME--------------LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASL------------------DTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQL-TRYEGQIKDVLPTPEK----------VNDA----IFYYARFEVPNP---NGLLRLDMTAQVHIQLTDVKVLT------------------------------------
7	SP3	3fppa	0.207	0.669	3.709	threading_7	--------------------------------------------PGDLQQSVLTGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME--------------LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKR------------------NQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTR-YEGQIKDVL----------PTPEKVNDAI----FYYARFEVPNPN---GLLRLDMTAQVHIQLTDVKN-VLT----------------------------------
8	SAM-T99	3lnnA	0.186	0.797	3.867	threading_8	ALRHEGERLVVPAESPLRRTLAVAPATRETVAAPFNLPAMIEADP-------------AKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD-------------------------LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGGHILA----------------VRSPINGRVVDLNAATGAYWNDTTALMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYPGKVRYVGQILDADTRTTK----------------------VRMVFDNPDGR---LRPGMFAQATFLSQPHEGIVVPMSAIVQSGFYTRAFVEVAPWQFEPRVIKLGAQIG
9	MUSTER	3lnnA	0.210	0.792	1.474	threading_9	----ALRHEGERLVVPAE--SPLRRTLAVAPATR--------ETVAAPFNLP--AMIEADLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD-------------------------LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGGH----------------ILAVRSPINGRVVDLNAATGAYWNDTASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDD--PQPGKVRYVGQ-------ILDAD--TRT-------TKVRMVFDNPD---GRLRPGMFAQATFLSQPHEGIVVPMSEVAPWQFEPRVIKLGAQIGDRME--VKS-SAG
10	SPARKS	3lnna	0.201	0.792	3.018	threading_10	HEGERLVVPAESPLRRTLAVAPATRE-----------------TVAAPFNLP--AMIEADLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD-------------------------LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGG----------------HILAVRSPINGRVVDLNAATGAYWNDTASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDD--PQPGKVRYVGQILDAD---------TRT-------TKVRMVFDNPD---GRLRPGMFAQATFLSQPHEGIVVPMSAIVQSGFYTRAFVEVAPKLGAQIGDRMEVKSG

Predicted Tertiary Structure


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TM-score=0.490 to 1iyuA SCOP code=b.84.1.1	TM-score=0.487 to 1iyuA SCOP code=b.84.1.1	TM-score=0.434 to 1ghkA SCOP code=b.84.1.1	TM-score=0.486 to 1iyuA SCOP code=b.84.1.1	TM-score=0.484 to 1iyuA SCOP code=b.84.1.1