Template-based Modeling Results for EDD_ECOLI

Submitted Primary Sequence

>Length 603
MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGNLAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVGQVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPGLTMAALSFGHLPAVFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAPGTCTFYGTANTNQMVVEFMGMQLPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWMPIGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMARLYPNGPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAGFGLSRYTLEPWLNNGELDWREGAEKSLDSNVIASFEQPFSHHGGTKVLSGNLGRAVMKTSAVPVENQVIEAPAVVFESQHDVMPAFEAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRCFKIALVTDGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAAREPHIPDLSASRVGTGRELFSALREKLSGAEQGATCITF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGNLAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVGQVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPGLTMAALSFGHLPAVFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAPGTCTFYGTANTNQMVVEFMGMQLPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWMPIGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMARLYPNGPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAGFGLSRYTLEPWLNNGELDWREGAEKSLDSNVIASFEQPFSHHGGTKVLSGNLGRAVMKTSAVPVENQVIEAPAVVFESQHDVMPAFEAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRCFKIALVTDGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAAREPHIPDLSASRVGTGRELFSALREKLSGAEQGATCITF
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCCCCCHHHCCCCEEEEEECHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEECEEEECCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECHHHHCCCCEEEECCCCEEEEECCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGNLAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVGQVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPGLTMAALSFGHLPAVFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAPGTCTFYGTANTNQMVVEFMGMQLPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWMPIGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMARLYPNGPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAGFGLSRYTLEPWLNNGELDWREGAEKSLDSNVIASFEQPFSHHGGTKVLSGNLGRAVMKTSAVPVENQVIEAPAVVFESQHDVMPAFEAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRCFKIALVTDGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAAREPHIPDLSASRVGTGRELFSALREKLSGAEQGATCITF
543311311210153133222201110321322111101120011000011022323222321420000000001100000010220030023002403110201110000010002023001000001100010000002110010000001002000000000000020000000100121111433302011012323133210210021102001001010000000000100101011001012312211200120121002002213320300200103001000000001100100000000002302030213002100420100010212030001001301100000210041100131011010200220022121332211113123412222000113211243100000101003010101001341210201010021121002002222034300000102013242102012000000001421010000011201111130000000002013301001023000010103202010102221012013313322224221123001001220112321100021
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGNLAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVGQVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPGLTMAALSFGHLPAVFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAPGTCTFYGTANTNQMVVEFMGMQLPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWMPIGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMARLYPNGPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAGFGLSRYTLEPWLNNGELDWREGAEKSLDSNVIASFEQPFSHHGGTKVLSGNLGRAVMKTSAVPVENQVIEAPAVVFESQHDVMPAFEAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRCFKIALVTDGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAAREPHIPDLSASRVGTGRELFSALREKLSGAEQGATCITF
1	MUSTER	2gp4A	0.598	0.821	3.631	threading_1	------------------------------------------------------------------HHSVVQSVTDRIIARSSREAYLAALNDARNEVGSVAQ-VAGVP--CDGVTQGQPGE-LSLLSREVIAATAVGLS---NFDGALLLGICDKIVPGLLIGALSF-GHLPLFVPAGP-------------------GKVDRAQLLEAEAQSYHSAGTCT--FYGQL-----LEVGLQLPGSSFVNPDDPLREALNKAAKQVCR--TELGTQYSPIGEVVNEKSIVNGIVALLATGGSTN-LTHIVAAARAAGIIVNWDDFSELSDAVPLLARVYPNGHADINHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPTVSLDTEVLTSVATPFQNNGGLKLLKGNLGRAVIKVSAVQPQHRVVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKANG-PELHKLTPLLGSLQDKGFKVAL-TDGRSGASGKV-PAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLVSDTELATRTATEIDLRHSRYG-GRELFGVLRSNLSSPETGARSTSY
2	SPARKS	2gp4a	0.590	0.826	5.554	threading_2	------------------------------------------------------------------HHSVVQSVTDRIIARSYLAALNDARNHLLKQEVGSVAQVAGVP--CDGVTQGQPGE-LSLLSREVIAATAVGL--SHNFDGALLLGICDKIVPGLLIGALSF-GHLPLFVPAGPG-------------------KVDRAQLLEAEAQSYHSAGTCTFYGQ-------LLEVGLQLPGSSFVNPDDPLREALN-KAAKQVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTNL-THIVAAARAAGIIVNWDDFSELSDAVPLLARVYPNGHADINHFHAAGGA-FLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPTVSLDTEVLTSVATPFQNNGGLKLLKGNLGRAVIKVSAVQPQHRVVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKANG-PELHKLTPLLGSLQDKGFK-VALTDGRSGASGKV-PAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLVSDTELATRTATEIDLRHSRYG-GRELFGVLRSNLSSPETGARSTSA
3	PROSPECT2	2gp4A	0.595	0.836	4.791	threading_3	HHSVVQSVTDRIIARSKASREAYLAALNDARNHLLKQ------------------------------------------------------------EVGSVAQVAGVP--CDGVTQGQPGE-LSLLSREVIAATAVGL--SHNFDGALLLGICDKIVPGLLIGALSF-GHLPLFVPAGP-------------------GKVDRAQLLEAEAQSYHSAGTC-------TFYGQLLEVGLQLPGSSFVNPDDPLREALNKAAK-QVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTN-LTHIVAAARAAGIIVNWDDFSELSDAVPLLARVYPNGHADINHFHAAGGA-FLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPTVSLDTEVLTSVATPFQNNGGLKLLKGNLGRAVIKVSAVQPQHRVVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKANG-PELHKLTPLLGSLQDKGFKV-ALTDGRSGASG-KVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLVSDTELATRTATEIDLR-HSRYGGRELFGVLRSNLSSPETGARSTSA
4	PPA-I	2gp4A	0.604	0.824	12.637	threading_4	------------------------------------------------------------------HHSVVQSVTDRIIARSSREAYLAALNDARNEVGSVAQVAGVP---CDGVTQGQPGE-LSLLSREVIAATAVGLSH--NFDGALLLGICDKIVPGLLIGALSFG-HLPLFVPAGP-------------------GKVDRAQLLEAEAQSYHSAGTCTFYGQ-------LLEVGLQLPGSSFVNPDDPLREALNKAAKQVCRL-TELGTQYSPIGEVVNEKSIVNGIVALLATGGSTNL-THIVAAARAAGIIVNWDDFSELSDAVPLLARVYPNGHADINHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPTVSLDTEVLTSVATPFQNNGGLKLLKGNLGRAVIKVSAVQPQHRVVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKANG-PELHKLTPLLGSLQDKGFKVAL-TDGRSGASGKV-PAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLVSDTELATRTATEIDLRHSRYG-GRELFGVLRSNLSSPETGARSTSA
5	HHPRED-l	2gp4_A	0.662	0.829	12.712	threading_5	-HSVVQSVTDRIIARSKASREAYLAALNDARNH--------------------------------------------------------LLK---QEVGSVAQVAG-VP--CDGVTQGQPG-ELSLLSREVIA-ATAVGLSHN-FDGALLLGICDKIVPGLLIGALSFGHLP-LFVPAGP-------------------GKVDRAQLLEAEAQSYHSAGTCTFYG--------LEV-GLQLPGSSFVNPDDPLREALNK-AAKQVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTNLT-HIVAAARAAGIIVNWDDFSELSDAVPLLARVYPNGHADINHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPTVSLDTEVLTSVATPFQNNGGLKLLKGNLGRAVIKVSAVQPQHRVVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKANG-PELHKLTPLLGSLQDKGFKVAL-TDGR-SGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLVSDTELATRTATEIDLRHSRYG-GRELFGVLRSNLSSPETGARSTS-
6	HHPRED-g	2gp4_A	0.661	0.831	10.736	threading_6	-HSVVQSVTDRIIARSKASREAYLAALNDARNH--------------------------------------------------------LLK---QEVGSVAQVAG-VP--CDGVTQGQPG-ELSLLSREVIA-ATAVGLSHN-FDGALLLGICDKIVPGLLIGALSFGHLP-LFVPAGP-------------------GKVDRAQLLEAEAQSYHSAGTCTFYG--------LEV-GLQLPGSSFVNPDDPLREALNK-AAKQVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTNLT-HIVAAARAAGIIVNWDDFSELSDAVPLLARVYPNGHADINHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPTVSLDTEVLTSVATPFQNNGGLKLLKGNLGRAVIKVSAVQPQHRVVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKANG-PELHKLTPLLGSLQDKGFKVAL-TDGR-SGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLVSDTELATRTATEIDLRHSRYG-GRELFGVLRSNLSSPETGARSTSA
7	SP3	2gp4a	0.594	0.824	1.740	threading_7	------------------------------------------------------------------HHSVVQSVTDRIIARSYLAALNDARNHLLKEVGSVAQVAG-VP--CDGVTQGQPGE-LSLLSREVIAATAVGL--SHNFDGALLLGICDKIVPGLLIGALSF-GHLPLFVPAGPG-------------------KVDRAQLLEAEAQSYHSAGTCT--FYGQ-----LLEVGLQLPGSSFVNPDDPLREALN-KAAKQVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTNL-THIVAAARAAGIIVNWDDFSELSDAVPLLARVYPNGHADINHFHAAGGA-FLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPTVSLDTEVLTSVATPFQNNGGLKLLKGNLGRAVIKVSAVQPQHRVVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKANG-PELHKLTPLLGSLQDKGF-KVALTDGRSGASGKV-PAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLVSDTELATRTATEIDLRHSRYG-GRELFGVLRSNLSSPETGARSTSA
8	SAM-T99	2gp4A	0.647	0.828	10.396	threading_8	HHSVVQSVTDRIIARSKASREAYLAALNDARNHLLKQEVG-----------------------------------------------------SVAQVAGVP---------CDGVTQGQPG-ELSLLSREVIA-ATAVGLSHN-FDGALLLGICDKIVPGLLIGALSFGHLP-LFVPAGP-------------------GKVDRAQLLEAEAQSYHSAGTCTFYG------QLLEV-GLQLPGSSFVNPDDPLREALN-KAAKQVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTNLT-HIVAAARAAGIIVNWDDFSELSDAVPLLARVYPNGHADINHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPTVSLDTEVLTSVATPFQNNGGLKLLKGNLGRAVIKVSAVQPQHRVVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPKANG-PELHKLTPLLGSLQDKGFKVAL-TDGR-SGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLLVSDTELATRTATEIDLRHSR-YGGRELFGVLRSNLSSPETGA-----
9	MUSTER	2gp4A1	0.553	0.579	2.174	threading_9	------------------------------------------------------------------HHSVVQSVTDRIIARSSREAYLAALNDARNEVGSVAQ-VAGVP--CDGVTQGQPGE-LSLLSREVIAATAVGLS---NFDGALLLGICDKIVPGLLIGALSF-GHLPLFVPAGP-------------------GKVDRAQLLEAEAQSYHSAGTCT--FYGQL-----LEVGLQLPGSSFVNPDDPLREALNKAAKQVCR--TELGTQYSPIGEVVNEKSIVNGIVALLATGGSTN-LTHIVAAARAAGIIVNWDDFSELSDAVPLLARVYPNGHADINHFHAAGG-AFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPTVSLDTEVLTSVATPFQNNGDLRHSRGRELFGVLRSNLSSPETGARSTSA-IDELY-----------------------------------------------------------------------------------------------------------------------------------------------------
10	SPARKS	2p1mb	0.105	0.819	0.749	threading_10	--P--EEVLEHVFSFIQLDKDRNSVS-------LVCKSWYEIERWCRRKVFIGNCYAVSPAT-----------VIRRFP---KVRSVELKGKPHFADFNLVPDWGGYVYPWIEAMSSSYTWLEIRLKRMVVTDDCLELIAK--SFKNFLVLSSCEGFSTDGLAAIAACRNLKELDLRESHFPDTYTSLVSLNISCL--ASEVSFSALERLVTR-CPNLKSLNRAVPLEKLATLLQ----RAPQGGYTAEVRPDVYSGLSVALSGCKELRCLSGWDAVPAYLPAVYSVCSRL-----------TTLNL------SYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALT-EQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIE-----------PKAPDYLTL-----EPLDIGFGAIVEKDLRR-----LSLSG--LLTDKVFEYIGTYAKKMEMLSVAFAGDSD------------------LGMH----HVLSG-------CDSRKLEIPFGDKALLANASKLETMRSSSCSVSFGACKLLGQKMPK-----LNVEV

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.885 to 2gp4A SCOP code=c.8.2.2	TM-score=0.881 to 2gp4A SCOP code=c.8.2.2	TM-score=0.872 to 2gp4A SCOP code=c.8.2.2	TM-score=0.888 to 2gp4A SCOP code=c.8.2.2	TM-score=0.881 to 2gp4A SCOP code=c.8.2.2