Template-based Modeling Results for EAMB_ECOLI

Submitted Primary Sequence

>Length 195
MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLAGMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQAKPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCWALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLAGMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQAKPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCWALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLAGMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQAKPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCWALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY
450210000000000000010020000000001101120010000000000000000001000002001000200000000000000010021323332242321100100001000010000000000100123231001000000000000000000000002001200320020001000000000002112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLAGMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQAKPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCWALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY
1	SPARKS	1kola	0.105	0.877	1.027	threading_1	MEKIRDLTCLSDILPTGYGPG-STVYVA------G--------AG-PVGLAAAASARLLGAAVVIDLNPARLAHAKAQGFEIALHEQIAALARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYV---TEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQT-----PVMKYNRALMQAIMWDINIAEVV
2	PROSPECT2	1t33A	0.081	0.949	1.196	threading_2	MNKSQLIAAALAQFGLHATGSKEDLYCAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPT----------SAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ
3	PROSPECT2	1pw4A2	0.086	0.897	1.171	threading_3	LPNKLLWYIAIANVFVYL----LRYGILDWSPTYALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIV--------YWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKK--------AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFDGGFMVMIGGSILAVILLIVV
4	PROSPECT2	2bkuB2	0.113	1.000	1.097	threading_4	LTLEDAQSLQELQSNISVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNSITAVGFIADISNSMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVATSRAAVGLIL
5	PROSPECT2	3ibvA1	0.056	1.000	1.089	threading_5	MSAQDVENGWKICHEIFSEKTKYKPSTRLICLQTSNLLELQMIRDSVWSYIYISNAVQHLLTLLFLQFASLQGVIANFYLKVLLSIGDEIADSLVLKTDVQIQKDNLVKDAIRANDMSDIVSFVYEMMLAYSNAKNYGTVGLCLQVYAQWCMNLLYSFLRCAACETMTEIVNKKMKPLEKLNLLNILNLNLFFSK
6	PROSPECT2	1oyzA	0.065	0.944	1.076	threading_6	LNDDELFRLISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQACVRATAIESTAQRCKKNPIYSPKIVEQSQITNVRRATAFAISVIAT---------IPLLINLLKDPNGDVRNWAAFAININ--KYDNSDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKEAAGELGDKTLLPVLS
7	MUSTER	4a2nB	0.098	0.887	0.753	threading_7	MNENLWKICFIVMFIIWV---FVRKVYGTRAMKNKSVRPNFEKSLVFLNFIGMVFLPLTAVFS-LPDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKDGHKLVKEGIYKNIHPMYAHLWLWVITQGI-----ILSNWVVLIFGIVAWAILYFIRVPKEEELLIEEFDEYIEYMGKT-------------L
8	SPARKS	1llua	0.137	0.862	0.992	threading_8	VEFAEIAGVTVYKGLKQARPG-QWVAIS------G--------IG-GLGHVAVQYARAMGLHVAIDIDDAKLELARKLGASLTVEDPVEAIQRDIGGAHTAVSNSAFGQAI--GMARRGGTIALVGLPP---GDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEGLDDINQILDQMEGRIVLEM------
9	PROSPECT2	1ezfa	0.062	1.000	1.046	threading_9	NSLKTCYKYLNFAAVIQALDGEMRNAVCIRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEEQEWDKYCHYVGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALVITYLSRLRNQSVFNFCAIPQVMAIATLAACY
10	PPA-I	1pw4A2	0.097	0.897	0.816	threading_10	LPNKLLWYIAIANVFVY----LLRYGILDWSPTYALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWM---------NPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPK-------KAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILL

Predicted Tertiary Structure


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TM-score=0.676 to 1kolA SCOP code=b.35.1.2	TM-score=0.875 to 1t33A SCOP code=a.4.1.9	TM-score=0.835 to 1pw4A SCOP code=f.38.1.1	TM-score=0.609 to 2vglB SCOP code=i.23.1.1	TM-score=0.546 to 1b3uA SCOP code=a.118.1.2