Template-based Modeling Results for EAMA_ECOLI

Submitted Primary Sequence

>Length 299
MSRKDGVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFAQFAFLFCAINFGMPAGLASLVLQAQAFFTIMLGAFTFGERLHGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVIWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMTGLYINVFGLRWRKAVKVGS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSRKDGVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFAQFAFLFCAINFGMPAGLASLVLQAQAFFTIMLGAFTFGERLHGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVIWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMTGLYINVFGLRWRKAVKVGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSRKDGVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFAQFAFLFCAINFGMPAGLASLVLQAQAFFTIMLGAFTFGERLHGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVIWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMTGLYINVFGLRWRKAVKVGS
45211000000000000000000100032011000000000000000000013231212100000000000000000000110010000000000000000000001123412022000000000000000112221320100000000000000000000022012322211000000000000000000001112221111111110202000000000000000000000100120312100000001000000000000213010120000000000000110123123123334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSRKDGVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFAQFAFLFCAINFGMPAGLASLVLQAQAFFTIMLGAFTFGERLHGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVIWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMTGLYINVFGLRWRKAVKVGS
1	MUSTER	3zuxA	0.088	0.953	1.052	threading_1	FIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLLGIIMFGMGLTL---FDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCTASNVMTYLA-RGNVALSVAVTSVSTLTSPLLTPA-LMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVV--GASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGMSGLAAALAAAHFAVVAVPGALFSVWHNISGSLLATYWAAKA-------
2	SPARKS	2x1gf	0.067	0.997	1.133	threading_2	VVLRAEIAKRVQLVIHTVERYLKLQMNRVWDAEAYSNMNRAVKCVGTWIKNI-GYTIEGCVTITAVLLEVVHKCYWPCIHGCMTADENELAESCLKTMVNIIIQPDCHNYPKTAFVLIKMFLDSLSEITKTEWKRENDNEDIIVHIYMLFVSSVERHSTLLLSGITSADPELSILVHRIVQEILHCTDKSCSTMALAFWYMLQDEVFAHKCWEYIKPLYAHLTRILVRKSEQPKSLAKWSSDDLECFRCYRQDISDTFMYCYDVLNDYILEILAAMLDEAIADLQRHPTHWTKLEACIY
3	PROSPECT2	2bkuB2	0.100	0.940	1.566	threading_3	TDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAPSSVEPVADMLMGLFFRLLAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDK------------------PEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFPDGSIKQFYGQDWVIDYIKRTLFSQATKDKRQLSL
4	PPA-I	3zuxA	0.076	0.970	0.985	threading_4	ILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDHPKVVIIGVIAQFAIMPATAWCLSKLLAEIAVGVILVGCCTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVG--ASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGMSGLAAALAAAHFAAAPVPGALFSVWHNISGSLLATYWAAKA-------
5	HHPRED-l	3b5d_A	0.152	0.331	3.327	threading_5	--------------------------------------------------------------------------------------------------------------------------------------------------YLGGAILAEVIGTTLMKFSEG----------------------------------FTR----------LWPSVGTIICYCASFWLLAQTLAYIPTGIAYAISGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS----------
6	HHPRED-g	3b5d_A	0.141	0.331	3.700	threading_6	--------------------------------------------------------------------------------------------------------------------------------------------------YLGGAILAEVIGTTLMKFS-EG---------------------------------FTR-----LW-----PSVGTIICYCASFWLLAQTLAYIPTGIAYAISGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS----------
7	SP3	3zuxa	0.095	0.953	0.556	threading_7	FIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLLGIIMFGMGLLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKNLPAEIAVGVILVGCCPTASNVMTYLARGNALSAVTSVSTLTSPLTPAIFLMLAGEMLEIQAAGMLMSIVKLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGAS-------KGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGMSGLAAALAAAHFAAAAVPGALFSVWHNISGSLLATYWAAKA-------
8	SAM-T99	3b61A	0.204	0.344	0.707	threading_8	---------------------------------------------------------------------YIYLGGAILAEVI---------------------------------------------------------------------------GTTLMKFS------EGFTRLWPSVGTIICYCASFW----------------------LLAQTLAYIPTGIAYAIWS---------------GVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSR---------
9	MUSTER	1t5jA	0.087	0.957	0.857	threading_9	VKMRDKILGSVFGAVIGDALGM---PTENLTKEEIKKLYGFVDSYVEPKNYLAGKLNKGEWTDDTEQAICLIKSLTKEGIDIK--KFANCLIAWKNLTSLMAIDKLENNDYSGVSSSCGAAMRIYPLGIVFHNNLKKLKEEVIKASKIKTAIAGALAIAFFVSSALKDRKDFSLLDECYNYIKDIDEEFAKKLLEIKNFNNLDYIYDYFGTGVKTDEVVPSAIATYLLTDNFKEGMLKC-INAGGDTDSLASMYGAMAGAYYGFKNIPKEWIDGL-----KEVIFELAERLYHLATE--
10	SPARKS	3m1ic	0.069	0.963	0.999	threading_10	IGIRNFVVGMIISMCQDDEVFKTQKNL--INKSDLTLVQILKQEWFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAKALHLKNSMSKEFEQIFKLCFQVEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELLSTKFMTTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLKATYANANGN--DQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLS-------KIEERELFKTTLDYWHNLVADLFYEPLKKHIYEE

Predicted Tertiary Structure


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TM-score=0.431 to 1itfA SCOP code=a.26.1.3	TM-score=0.429 to 1pw4A SCOP code=f.38.1.1	TM-score=0.651 to 1xqrA SCOP code=a.118.1.21	TM-score=0.702 to 3ea5B SCOP code=a.118.1.1	TM-score=0.420 to 1itfA SCOP code=a.26.1.3