Template-based Modeling Results for DUSA_ECOLI

Submitted Primary Sequence

>Length 330
MPEKTDVHWSGRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADINVLEHALKLVADKR
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPEKTDVHWSGRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADINVLEHALKLVADKR
CCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCEEHHHHHHCCHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEECHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPEKTDVHWSGRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADINVLEHALKLVADKR
554323131202000000120012001100331132100001100010002121310232333100000002110200020020033211110000010003201322100001121300120030023113120001000001333213100200110134030100000013111222212222321201121012013202301000001030031021002301000000101400000000012022224232311100210021013113322200100200000031021032013001331432221120022013212344
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPEKTDVHWSGRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADINVLEHALKLVADKR
1	MUSTER	3b0pA	0.461	0.921	3.319	threading_1	--------LDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAE-AGVKVFVVHARSAL-----------IPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKRVDGVMLGRAVYEDPFVLEEADRRVFGLP-RRPSRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEG-----RSLQALDRALRLMEEEV
2	SPARKS	3b0pa	0.461	0.921	6.858	threading_2	--------LDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAE-AGVKVFVVHARSAL-----------IPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKRVDGVMLGRAVYEDPFVLEEADRRVFGLPR-RPSRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRS-----LQALDRALRLMEEEV
3	PROSPECT2	3b0pA	0.461	0.921	4.817	threading_3	L--------DPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRELLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAE-AGVKVFVVHARSA-----------LIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKRVDGVMLGRAVYEDPFVLEEADRRVFGLP-RRPSRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEG-----RSLQALDRALRLMEEEE
4	PPA-I	3b0pA	0.454	0.927	7.343	threading_4	--------LDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAE-AGVKVFVVHARSAL-----------IPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKRVDGVMLGRAVYEDPFVLEEADRRVFGLPR-RPSRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRS-LQALDRALRLMEEEVGE--
5	HHPRED-l	1vhn_A	0.216	0.885	5.569	threading_5	----------VKVGLAP-AGYTDSAFRTLAFEWGAD-FAFSE-VSAKGFL-NSQKTLLPQPHERNVAVQIFGSEPNELSEAARILSE-KYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEE-----IYRILVEEGVDEVFIHTRTV--------VQSFTGRAEWKALSVLEK---RIPTFVSGDIFTPEDAKRALEGCDGLLVARGAIGRPWIFKQIKDFLRSGKYSEPSREEILRRHLELLIKTKGERKAVVE-RKFLAGYTKDLKGARRFREKV-KIEE-VQILKE-FYNFIKEVE---
6	HHPRED-g	3b0p_A	0.461	0.921	6.267	threading_6	--------LDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRRLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMA-EAGVKVFVVHARSAL-----------IPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKRVDGVMLGRAVYEDPFVLEEADRRVFG-LPRRPSRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEG-----RSLQALDRALRLMEEEV
7	SP3	3b0pa	0.461	0.921	7.161	threading_7	--------LDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAE-AGVKVFVVHARSAL-----------IPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKRVDGVMLGRAVYEDPFVLEEADRRVFGLP-RRPSRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRS-----LQALDRALRLMEEEV
8	SAM-T99	3b0pA	0.444	0.927	8.608	threading_8	--------LDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAM-AEAGVKVFVVHARSAL-----------IPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKRVDGVMLGRAVYEDPFVLEEADRRVFGLPRRP-SRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVGE---
9	MUSTER	1vhnA	0.215	0.888	2.365	threading_9	V----------KVGLAP-AGYTDSAFRTLAFEWGAD-FAFSEVSAKGFLNSQKTEELLPQPHERNVAVQIFGSEPNELSEAARILSE-KYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNE-----VEEIYRILVEEGVDEVFIHTRT--------VVQSFTGRAEWKALSVLEKRIP---TFVSGDIFTPEDAKRALEESDGLLVARGAIGRPWIFKQIKDFLRSGKYSEPSILRTFERHLELLIKTKGERKAVVE--KFLAGYTKDLKGARRFREKVK---IEEVQILKEFYNFIKEVE---
10	SPARKS	1vhna	0.220	0.894	4.487	threading_10	----------VKVGLAPA-GYTDSAFRTLAFEWGAD-FAFSEVSAKGFLNSQKTEELLPQPHERNVAVQIFGSEPNELSEAARILSE-KYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNE-----VEEIYRILVEEGVDEVFIHTRTVVQSFTGR--------AEWKALSVLEKRIP---TFVSGDIFTPEDAKRALEECDGLLVARGAIGRPWIFKQIKDFLRSGKYSEPSREEILRTFERHLELLIKTKGERKAVRKFLAGYTKDLKGARRFREKVK------IEEVQILKEFYNFIKEVE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.768 to 1vhnA SCOP code=c.1.4.1	TM-score=0.771 to 1vhnA SCOP code=c.1.4.1	TM-score=0.772 to 1vhnA SCOP code=c.1.4.1	TM-score=0.770 to 1vhnA SCOP code=c.1.4.1	TM-score=0.776 to 1vhnA SCOP code=c.1.4.1