Template-based Modeling Results for DSDX_ECOLI


  Submitted Primary Sequence

>Length 445
MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSVDVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKTLPSLGATLFTILLPIALMLVKTIAELNMARESGLYILVEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSVDVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKTLPSLGATLFTILLPIALMLVKTIAELNMARESGLYILVEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSVDVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKTLPSLGATLFTILLPIALMLVKTIAELNMARESGLYILVEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII
5432101000000000000000010100000000000000000121202200200121011000100000000000020022010012002101303211020001000000000000100000001001100331311001000000000000000011110010003301021000000000000000000000002001331224212221232324333212210210000000000100200030212432001100200121000000000000000013332202101210220011000000000001001200320201200010022120000000000000000011000000000000001012212300010000000000000000001100002200102132002011000000000000000001112
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSVDVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKTLPSLGATLFTILLPIALMLVKTIAELNMARESGLYILVEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII
1PROSPECT21jdha0.0890.9372.178threading_1NDEDQVVVNKAAVMVHMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMSVLFYAITTLHNLLLHQEGAKMAVRLVALLNKTNVKFLAITTDCLQILQESKLIILAGPQALVNIMRTYTYEKLLWTTSRVLKVL-------SVCSSNKPAIVEAG-------GMQALGLQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGV--------------LCELAQDKEAAEAIEAEGATAPLTELLHTYAAAVLFRMS
2PPA-I3zuxA0.1610.6701.265threading_2-------------------------------------------------NILSKISSFIGKTFSLWAALFAAAAFFPDTFKWAGPYIPWLLGIIMFGTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCC------PGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLM---------------SIVKMVLLPIVLGLIVHKVL-----GSKTEKLTDAL--PLVSVAAIVLIIGAVVGAS----KGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGMQNSGLAAALAAAHFAVPGALFSVWHNISGSLLATYWAAKA------------------------------------------------------------------
3PROSPECT21ejlI0.1060.8672.015threading_3NSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFES-------AWALTNIASGTSEQTKAVVDGGAIPAFISLL---ASPHAHISEQAVWALGNIAGDGSAFRDLVIKAIDPLLALLAVPDLGYLRNLTWTLSNLCRNKNPAPPLDAVVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVK-----------------------KGVVPQLVKLLLPIVTPALRAIGNIVTGTDEQTQKVIDA---GALAVFPSL----------LTNPKTNIQKEA------TWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLG-------ETEKLSIMIEECGGLDKIEALQRASLNLIEKYFS
4PPA-I3dh4A0.1010.9331.182threading_4AIASYEWMSAITLIIVGKYFLPIFIEKG----IYTIPEFVEKRFN-KKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIPLMYSILGLALFAL---VYSIVV----WTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAGVSKMVDAAPGHFEMILDQSWVANLYYWGFNQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDPQLMASLGDIAATNLPSAANADKAYPWLTQFLPVGVKGVVFAALA-----AAIVSSLASM---LNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIACLIAP------MLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKTTSKGAIIGVVASIPFALFLKFMPLSMPLYTLLFTMVVIAFTSNDDDPKGISVTSSMFVTDRSFNIAAYGIMIVLAVLYTLFWVLYK----
5PROSPECT21ee4a0.0870.8832.008threading_5NSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEA-------AWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRD-YVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALYSMDTETLVDACWAISYLSDGPQEAIQAVID-----------------------VRIPKRLVELLTLVQTPALRAVGNIVTGNDLQTQVVIN---AGVLPALRLLL----------SSPKENIKKEA------CWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAETKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEA--DKEARGLNINENADFIEKAGGMEKIFNCIYEKAYKIIETYF
6PPA-I1xm9A0.0810.8631.178threading_6SSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPN------QNVQQAAAGALRNLVF---RSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSKEELIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLS-----SADAGRQTMRNYSGLIDSLMAYVQNCVAASVENCMCVLHNLSYRLDAEVPRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLK------EKGLPQIARLLSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNSEDILSSACYTVRNLMASPQLAKQYFSSSMLNNIINLCSSASPKAAEAARLLLSDMWSSLQGVL-----------------------------------------
7PROSPECT21b3ua0.0800.9821.986threading_7IYDEDEVLLALAEQLYVHCLLPPLESLETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGFTSRTSACGLFSVCYPRVSSAAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPEDKSWTELQKAVGPEITKTDLVPAFQNLMVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIE-HLLPLFLAQLKDECPEVRLNIISNLDCVNEV--IGIRQLSQSLLPAIVELAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWA----HATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITKSLQKIGPILDNSTLQS-EVKPILEKLVKYFAQEALTVLS
8PPA-I1wa5B0.0770.8991.141threading_8NSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASG-------TSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTL----------VQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITA---GNTEQIQAVIDANLIPPLVKLLEVAECWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIANRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNEN-------------------------DKIYEKAYKIIETYFG
9PROSPECT23a6pA10.0670.9081.882threading_9AMDQVNALCEQLVKAVTVMMQRYRLEALKFCEEFKEK-------CPICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNGMSRLEKVMELIANGTLNILEEENHIKDALSRI-----VVEMIKREMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQV-----------------------KTDTSQESKAQANCRVGVAALNTLMSHITAENCKLLEILCLLEQELQLGAAECLLIAV----SRKGKLEDRKPLMVLFGDVAMHYILHYVFLKRLCQVLCA--LGNQLCALLGADSDVETNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILSRDPLLASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNQGEVMRLACRLDPKTSFQMAG
10PPA-I2jdqB0.0980.8521.126threading_10-----------------------------------------------TSDMIEMIFSKSPEQQLSATQKFRKLLSIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAG-----DSTMCRDYVLDCNILPPLLQLFSKQLTMTRNAVWALSNLCR------------GKSPPPEFAKVSPCLNVLSWLLTDVLADACWALSYLSDGPNGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQLQSLLHLLESIKKEACWTISNITAGRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEA--KRNGTGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAF

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.569 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.669 to 1wa5B
SCOP code=a.118.1.1
TM-score=0.421 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.898 to 1kpkA
SCOP code=f.20.1.1
TM-score=0.809 to 1ialA
SCOP code=a.118.1.1