Template-based Modeling Results for DNAJ_ECOLI

Submitted Primary Sequence

>Length 376
MAKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPAGVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLNERQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPAGVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLNERQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCEECCCEEEEEEECCHHHHHCCCEEEECCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPAGVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLNERQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR
5453111100101210334101300120024001132421330231022033003102113111111210111121101111111100000000010011011113133222422101010201022003112220202223303203122143223111022030101011221100111102204120111432033041202122222020201210321210101121211332011000000010230320223221000100010010012120202113131202022413212101021310320211230000010102013313360230022025223232233323323100310230034135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPAGVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLNERQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR
1	MUSTER	1nltA	0.288	0.582	2.760	threading_1	--------------------------------------------------------------------------------------------------------------PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRMIQRFQTECDVCHGTGDIIKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIP-GDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGWLKVGIVPGIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPE---------------------------------------------
2	SAM-T99	1bq0A	1.000	0.205	3.295	threading_2	-AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	SPARKS	1nlta	0.288	0.582	4.843	threading_3	--------------------------------------------------------------------------------------------------------------PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVK-KCTSCNGQGIKFVTRMIQRFQTECDVCHGTGDIIKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIP-GDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDLKVGIVPGIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPE---------------------------------------------
4	PROSPECT2	1nltA	0.279	0.582	3.583	threading_4	--------------------------------------------------------------------------------------------------------------PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVK-KCTSCNGQGIKFVTRMIQRFQTECDVCHGTGDIIKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEAD-QAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSDWLKVGIVPGIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDP---------------------------------------------E
5	PPA-I	1nltA	0.288	0.582	7.238	threading_5	--------------------------------------------------------------------------------------------------------------PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVK-KCTSCNGQGIKFVTRMIQRFQTECDVCHGTGDIIKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIP-GDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDLKVGIVPGIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPE---------------------------------------------
6	HHPRED-l	3lz8_A	0.378	0.492	5.263	threading_6	--------------------------------------------------------------------------------------------------------------AARGHDLEIEVAVFLEETLAEQTRTISYN---------------------------------------------------------LPVYNVFGESETPKTLNVKIPAGVVDGQRIRLKGQGTPG---GPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSK-T-HTGDLFAVIKIVMPTKPDEKARELWQQLAAAEASFD-----PRK-TW-------------
7	HHPRED-g	3lz8_A	0.382	0.495	4.588	threading_7	--------------------------------------------------------------------------------------------------------------AARGHDLEIEVAVFLEETLAEQTRTISYN---------------------LPV----------------------YNVFG-I------------ESETPKTLNVKIPAGVVDGQRIRLKGQGTPG---GPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVS-KTH-TGDLFAVIKIVMPTKPDEKARELWQQLAAAEAS-----FDPRKT-W-------------
8	SP3	1nlta	0.288	0.582	4.227	threading_8	--------------------------------------------------------------------------------------------------------------PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVK-KCTSCNGQGIKFVTRMIQRFQTECDVCHGTGDIIKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIP-GDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDLKVGIVPGIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPE---------------------------------------------
9	MUSTER	3lz8A	0.382	0.495	2.172	threading_9	--------------------------------------------------------------------------------------------------------------AARGHDLEIEVAVFLEETLAEQTRTISYN---------------------LPVYNVFGIES-----------------------------------ETPKTLNVKIPAGVVDGQRIRLKGQGTP---GGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLV--SKTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAEAS-----FDPR-KTW-------------
10	SPARKS	3lz8a	0.366	0.495	4.759	threading_10	--------------------------------------------------------------------------------------------------------------AARGHDLEIEVAVFLEETLAEQTRTISYN----LPVYNVFGI----------------------------------------------------ESETPKTLNVKIPAGVVDGQRIRLKGQGTPG---GPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLV--SKTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAEASFDPRKTW-------------------

Predicted Tertiary Structure


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TM-score=0.631 to 1nltA SCOP code=b.4.1.1	TM-score=0.593 to 1bq0A SCOP code=a.2.3.1	TM-score=0.665 to 1nltA SCOP code=b.4.1.1	TM-score=0.657 to 1nltA SCOP code=b.4.1.1	TM-score=0.601 to 1c3gA SCOP code=b.4.1.1