Template-based Modeling Results for DMSD_ECOLI

Submitted Primary Sequence

>Length 204
MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWETQWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFEMKQNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWSTRFLDVFIEKAEHPFYRALGELARLTLAQWQSQLLIPVAVKPLFR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWETQWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFEMKQNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWSTRFLDVFIEKAEHPFYRALGELARLTLAQWQSQLLIPVAVKPLFR
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWETQWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFEMKQNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWSTRFLDVFIEKAEHPFYRALGELARLTLAQWQSQLLIPVAVKPLFR
553221121000002000000122032210120020022222323122222001100201323133100200120010232220111100112332221130011013003312031324342131100000100010032133210220022000200220020023213120020002002100220132032222243224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWETQWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFEMKQNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWSTRFLDVFIEKAEHPFYRALGELARLTLAQWQSQLLIPVAVKPLFR
1	MUSTER	3efpB	1.000	1.000	3.094	threading_1	MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWETQWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFEMKQNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWSTRFLDVFIEKAEHPFYRALGELARLTLAQWQSQLLIPVAVKPLFR
2	SPARKS	1s9ua	0.745	0.961	4.907	threading_2	ATTFLQRDEFAVTARVLGALFYYSPESHETAPLVQALLNDDWQAQWPLDAEALAPVA-AFKTHSEESLPQAWQRLFIGPYALPSPPWGSVWLDRESVLFGDSTLALRQWREN-------GIQEPEDHFGSLLLLAAWLAENDRHHECEQLLAWHLFPWSSRFLDVFIDHAGHPFYQALGQLARLTLAQWQAQLIIPVAVKPLFR
3	PROSPECT2	1s9uA	0.740	0.961	2.620	threading_3	ATTFLQRDEFAVTARVLGALFYYSPESHETAPLVQALLNDDWQAQWPLDAEALAPVAA-FKTHSEESLPQAWQRLFIGPYALPSPPWGSVWLDRESVLFGDSTLALRQ-------WRENGIQEPEDHFGSLLLLAAWLAENDRHHECEQLLAWHLFPWSSRFLDVFIDHAGHPFYQALGQLARLTLAQWQAQLIIPVAVKPLFR
4	PPA-I	3efpB	1.000	1.000	3.406	threading_4	MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWETQWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFEMKQNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWSTRFLDVFIEKAEHPFYRALGELARLTLAQWQSQLLIPVAVKPLFR
5	HHPRED-l	1s9u_A	0.768	0.951	8.124	threading_5	-TTFLQRDEFAVTARVLGALFYYSPESHETAPLVQALLNDDWQAQWPLDAEALAPVAA-FKTHSEESLPQAWQRLFIGPYALPSPPWGSVWLDRESVLFGDSTLALRQW-RENGIQ------EPEDHFGSLLLLAAWLAENDRHHECEQLLAWHLFPWSSRFLDVFIDHAGHPFYQALGQLARLTLAQWQAQLIIPVAVKPLF-
6	HHPRED-g	1s9u_A	0.769	0.956	7.047	threading_6	-TTFLQRDEFAVTARVLGALFYYSPESHETAPLVQALLNDDWQAQWPLDAEALAPVAA-FKTHSEESLPQAWQRLFIGPYALPSPPWGSVWLDRESVLFGDSTLALRQW-RENGIQ------EPEDHFGSLLLLAAWLAENDRHHECEQLLAWHLFPWSSRFLDVFIDHAGHPFYQALGQLARLTLAQWQAQLIIPVAVKPLFR
7	SP3	1s9ua	0.745	0.961	5.292	threading_7	ATTFLQRDEFAVTARVLGALFYYSPESHETAPLVQALLNDDWQAQWPLDAEALAPVA-AFKTHSEESLPQAWQRLFIGPYALPSPPWGSVWLDRESVLFGDSTLALRQWREN-------GIQEPEDHFGSLLLLAAWLAENDRHHECEQLLAWHLFPWSSRFLDVFIDHAGHPFYQALGQLARLTLAQWQAQLIIPVAVKPLFR
8	SAM-T99	3efpB	1.000	1.000	7.030	threading_8	MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWETQWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFEMKQNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWSTRFLDVFIEKAEHPFYRALGELARLTLAQWQSQLLIPVAVKPLFR
9	MUSTER	1n1cA	0.174	0.931	1.929	threading_9	---VDINPARALVYQLLSSLFAREVDEQRLKELEAAQQFWEQLSLEANFTQSVDKIRSTLNGIALLELAADYCGLFLVGTS--ASPYASLY-----LLLFGEQHQQSEFLHQSKLQVQSHFPEPADHLAVLAY--AHLCCHSENSVQLSFLQTCVNSWLAKFINHLTQCNKNGFYSAVATLTLAWVKQDIAQLEPAVAIISL--
10	SPARKS	1n1ca	0.174	0.931	3.510	threading_10	---VDINPARALVYQLLSSLFAREVDEQRLKELEAAQQFWEQLSLEANFTQSVDKIRSTLNGEALLELAADYCGLFLVGT--SASPYASLY-----LLLFGEQHQQSEFLHQSKLQVQSHFPEPADHLAVLA--YAHLCCHSENSVQLSFLQTCVNSWLAKFINHLTQCNKNGFYSAVATLTLAWVKQDIAQLEPAVAIISL--

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.692 to 2o9xA TM-score=0.986 to native SCOP code=a.184.1.1	TM-score=0.692 to 2o9xA TM-score=0.986 to native SCOP code=a.184.1.1	TM-score=0.668 to 2o9xA TM-score=0.917 to native SCOP code=a.184.1.1	TM-score=0.667 to 2o9xA TM-score=0.916 to native SCOP code=a.184.1.1	TM-score=0.692 to 2o9xA TM-score=0.986 to native SCOP code=a.184.1.1

Experimental Structure

Download 3efpA

SCOP code=a.184.1.1