Template-based Modeling Results for DJLA_ECOLI

Submitted Primary Sequence

>Length 271
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
3320020000000000100010000000001001212223222223233110100000010002003132311321020012002312132201210110032222332203210210121021123002100100010011112122312100110032120232102201310200131222233322223233134222230002112033123221013001200231011312142113301320331022023012103333324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
1	SPARKS	1wjza	0.305	0.303	2.016	threading_1	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSA-DVPAGTMEECMQKFIEIDQAWKILGNEETKK
2	PROSPECT2	2fozA	0.086	0.989	1.168	threading_2	MASLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPEALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLNPKCRDVFEPARAGISLAYSSVQDVQILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIDPEIPSAFNSLQRTLIYSIS--LGGYYGMDQVPESWQQSCEGY-EETDILAQSLHRVFQKS
3	SP3	1wjza	0.305	0.303	2.004	threading_3	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSAD-VPAGTMEECMQKFIEIDQAWKILGNEETKK
4	HHPRED-l	2jxu_A	0.163	0.520	2.661	threading_4	-----------------------------MSFFDKVKGALTSGREVGRYKNKKFMQGTVAVCARIAVASDGVSSEEKQKMIGFLRSSELKVFDTAEVIEFFNKLV-TSFDFDLTMKYILA-LKDQPEAAQLALRVGIAVAKSDGNFDDDEKSAVREIARSLGFDPAEFGLLE---------------------------------------------------------------------------------------------------
5	SAM-T99	2dmxA	0.359	0.236	2.526	threading_5	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKN------PDNKEEAEKKFKLVSEAYEVLSDSKKR-
6	HHPRED-g	2ou3_A	0.181	0.572	2.197	threading_6	-SDIKKL-----------------GSSWIINFF--GFNQI-----PTNEDSS----IY-KSVLTCAKADGVISPEEKDWALGFCASWGVADWVIEDLKT-----YEADEALEEVIARSPQVS-AQRD----ILLSAIWVSAADGELHEKEKAKIRK-ATILGIKEEIVDQLEQLYYYEAALRQKRLNL----LYPQK-SP------Y----------------------------------------------------------------
7	SPARKS	2dmxa	0.314	0.258	1.924	threading_7	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNK------EEAEKKFKLVSEAYEVLSDSKKRS
8	PROSPECT2	3a0oA3	0.088	0.963	1.157	threading_8	HCGWAEFYEKSVEPWLERPVIYAIRHLAIAGRVLAVAAWDTKGATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLER-----TREVADHVIAHARIHVFPLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSPWAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTKAPGTRRANFGDDSTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATG-----TEMAFYNYGWWDLNFDDLVYRHDYAVSPADLP
9	SP3	2ys8a	0.279	0.317	1.887	threading_9	-----------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGSSA--------SFTKEQADAIRRIR--------------------------NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPG--------SEDAFKAVVNARTALLKNIKSG
10	HHPRED-l	2ou3_A	0.192	0.576	2.415	threading_10	-SDIKK-LGS---------------SWIINWFF--GFNQIP------TNED---SSIY-KSVLTCAKADGVISPEEKDWALGFCASWGVADWVIEDLKT-----YEADEALEEVIARSPQVS-A----QRDILLSAIWVSAADGELHEKEKAKIRK-ATILGIKEEIVDQLEQLYYYEAALRQ------------------------------------------KRLNL-LYPQKSPY--------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.510 to 1wjzA SCOP code=a.2.3.1	TM-score=0.720 to 1t5jA SCOP code=a.209.1.1	TM-score=0.513 to 1wjzA SCOP code=a.2.3.1	TM-score=0.386 to 1eo0A SCOP code=a.48.3.1	TM-score=0.404 to 1fpoA SCOP code=a.2.3.1