Template-based Modeling Results for DPO4_ECOLI

Submitted Primary Sequence

>Length 351
MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL
CCEEEEECCCHHHHHHHHHHCHHHCCCEEEECCCCCCCEEEEECCHHHHHHCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL
312000000000000011231220331000001243320000001120331103100000101410120000103120022002101300131023010000110000012012122202100220121013204000000002020002001323213000001121012102202022010003200210241102001102402121013101200210011021123331223323311001100233132121012002300220132024233321001000102133131101121124122110020023002333223100000000131333233222224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL
1	MUSTER	3fdsA	0.287	0.983	3.436	threading_1	M-IVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIEAKAKYLISLARDEYNEPIRT-RVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDK----RIPKAIHVVAVTEDLDIVSRGRTFPHGSKETAYSESVKLLQKIEDERKIRRIGVRFSKFIEAIGLDKFFDT
2	SPARKS	3ospa	0.238	0.957	6.090	threading_2	TYIIFHIDFDCFFATVAYLCRSSSKRDPIVVCHGT-KNSDIASCNYVARSYGIKNGMWVSQAEKMLPNLISLPYTFEQFQLKSEAFYSTLKRLNNLILPISIDEAVCVRII---PDTLNARLCEEIRQEIFQGTGCTVSIGCSDSLVLARLALKMAKPNGYNITFKSNLEEFWSSFKLDDLPGVGHSTLSRLESTSPHSLNDLRKYTLDALKASVSKLGMKIHLALQGQDDEESLKVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLLEKLNE--INKTTSQITLKLMRGRCDSFSRSSRLGTNEFGIIATEMKSLYRTLGPPMELRGLALQFNKLVDV---------
3	PROSPECT2	3gqcA	0.323	0.972	5.412	threading_3	QSCIMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGTRAEIASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAETKTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDDFIRGQLVTNLPGVGHSMESKLASLGIKTCGDLQYMTMAKLQKEFGKTGQMLYRFCRGLDDRPVRTEKERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEA--TGMKGKRLTLKIMVGICDNIARTVTLDQDNAKIIGKAMLNMFHTMKLNSDMRGVGIHVNQLVPTN--------
4	PPA-I	3fdsA	0.284	0.983	7.038	threading_4	-MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIEAKAKYLISLARDEYNEPIRT-RVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLD----KRIPKAIHVVAVTEDLDIVSRGRTFPHGSKETAYSESVKLLQKIEDERKIRRIGVRFSKFIEAIGLDKFFDT
5	HHPRED-l	3gqc_A	0.315	0.977	4.723	threading_5	QSCIMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGTGAEIASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAETKTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDDFIRGQLVTNLPGVGHSMESKLASLGIKTCGDLQYMTMAKLQKEFGPTGQMLYRFCRGLDDRPVRTEKERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEATGMKGKRLTLKIMVRKPKFDNRTVTLDQATDNAKIIGKAMLNMFHTMKNISDMRGVGIHVNQLVPTN--------
6	HHPRED-g	3pzp_A	0.376	0.954	4.142	threading_6	SNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGS----MSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEEGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQ-RALLSLLFSESWHYFLHISLGLGSTHLTRDGERKSMSVERTFSE-INKAEEQYSLCQELCSELAQDLQKE--RLKGRTVTIKLKNVNFEVKTRASTVSSSTAEEIFAIAKELLKTEIHPLRLRLMGVRISSFPNEE--------
7	SP3	3ospa	0.241	0.957	6.342	threading_7	TYIIFHIDFDCFFATVAYLCRSSSKRDPIVVCHGT-KNSDIASCNYVARSYGIKNGMWVSQAEKMLPNLISLPYTFEQFQLKSEAFYSTLKRLNNLILPISIDEAVCVRIIP---DTLNARLCEEIRQEIFQGTGCTVSIGCSDSLVLARLALKMAKPNGYNITFKSNLEEFWSSFKLDDLPGVGHSTLSRLESTSPHSLNDLRKYTLDALKASVSKLGMKIHLALQGQDDEESLKVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLLEKLNE--INKTTSQITLKLMRRRCDSFSRSSRLPTNEFGIIATEMKSLYRTLGPPMELRGLALQFNKLVDV---------
8	SAM-T99	2oh2B	0.377	0.946	5.428	threading_8	-NTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSM----SMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSE-INKAEEQYSLCQELCSELAQDLQKE--RLKGRTVTIKLKNVNFEVKTRASTVSSSTAEEIFAIAKELLKTEIHPLRLRLMGVRISSFP-----------
9	MUSTER	3bq1A	0.296	0.954	3.338	threading_9	M-IVIFVDFDYFFAQVEEVLNPQYKGKPLVVCGRTKTSGAVATANYEARKLGVKAGMPIIKAMQIAPSAIYVPMRKPIYEAFSNRIMNLLNKHADKIEVASIDEAYLDVTNVEGNFENGIELARKIKQEILEKEKITVTVGVAPNKILAKIIADKSKPNGLGVIRPTEVQDFLNELDIDEIPGIGSVLARRLNELGIQKLRDILSKNYNELEKITGAKALYLLKLAQNKYSEPVEN-KSKIPHGRYLTLPYNTRDVKVILPYLKKAINEAYNKV-----NGIPMRITVIAIMEDLDILSKGKKFKHGSIDNAYKVAEDLLRELDKRRNVRRIGVKLDNIIIN---------
10	SPARKS	3mr4a	0.304	0.966	5.872	threading_10	DRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQKSWKGGGIIAVSYEARAFGVTRSMWADDAKKLCPDLLLAQVNLTKYREASVEVMEIMSRFAV-IERASIDEAYVDLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPIRKIRSLGKLGASVIEILGIEYMGELTQFTESQLQSHFEKNGSWLYAMCRGIEHDPVKPRQLPKTIGCSKNFPGKLATREQVQWWLLQLAQELEERLTKDRNDRVATQLVVSIRVQGDKRLRRCCALTRYDAHKMSHDAFTVIKNCNIQPPLTMLFLCATKFS-----------

Predicted Tertiary Structure


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TM-score=0.730 to 3bq1A SCOP code=d.240.1.1	TM-score=0.729 to 3bq1A SCOP code=d.240.1.1	TM-score=0.699 to 1t3nA SCOP code=d.240.1.1	TM-score=0.756 to 1t3nA SCOP code=d.240.1.1	TM-score=0.727 to 3bq1A SCOP code=d.240.1.1