Template-based Modeling Results for DEOD_ECOLI

Submitted Primary Sequence

>Length 239
MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE
CCCCEECCCHHHCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECEEEECCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE
55200020321200300000111200320032013302101201201001011311300000011011000000210022021210000000101133031200000000001230121213323111101130021002003312120100000011112132230021034121100100000000001212020000000001122333222221221022002000210122344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE
1	MUSTER	1oumA	0.996	0.992	3.359	threading_1	-ATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGVGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDK-
2	SPARKS	3mb8a	0.284	0.987	4.910	threading_2	EVQPHIRLRKEDVEPVVIIVGDPARTEEVAN-MCEKKQELAYNREYRSFRVVYDSQPITVISHGIGCPGTSIAIEELAY-LGAKVIIRAGTCGSLKPKLKQGDVCVTYAAVNETGLIS-NILPEGFPCVATPHVYQALMDAAKELGIEAASGIGVTQDYFYQNGILPKLEMYSKCCDVIDMEMSGVLGLCQARGIATCGILAVDGSPLQWDEATGVKATTGKENMVKITLKACANLRRQ
3	PROSPECT2	3occA	0.907	0.992	5.218	threading_3	--TPHINAEMGDFADVVLMPGDPLRAKFIAETFLQDVREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYAKELITDFGVKKIIRVGSCGAVRTDVKLRDVVIGMGACTDSKVNRMRFKDHDYAAIADFEMTRNAVDAAKAKGVNVRVGNLFSADLFYTPDPQMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTGEQTTAAERQTTFNDMIEIALESVLLGDNA
4	PPA-I	3tl6A	0.467	0.950	3.790	threading_4	CPTPHNGAKYGEIAETVLMAGDPLRVKLLADTYLTDVVQYNSVRGAVGYTGYYKGVKLSVQAHGMGMPSIGIYAYELFNFYGVKRIIRIGSAGAFDESLKLGDIVIGMGACYDSNFERQYDIPGKYSCIADFQLCREAVDAAEKLGYRYKVGNIYSANYFYDDGD-HSGAWKKMGVLAVEMEAAALYMIAARARKQALCMLTISDLCYGSGEKT------KFTQMMEVALSLAK-----
5	HHPRED-l	1vhw_A	0.797	0.992	3.683	threading_5	-ATPHINAQMGDFADVVLMPGDPLRAKYIAENFLDNAVQVCDVRNMFGYTGTYKGRRISVMGHGMGIPSCSIYVTELIKDYGVKKIIRVGSCGAVNEGIKVRDVVIGMGACTDSKVNRIRFKDHDFAAIADYKMVKAAEEAAKARGIDVKVGNLFSAELFYTPDPSMFDVMDKYGIVGVEMEAAGIYGVAAEYGAKALAICTVSDHIKTGEQTTSEERQNTFNEMIEIALDSVLIGDQ-
6	HHPRED-g	1vhw_A	0.797	0.992	3.276	threading_6	-ATPHINAQMGDFADVVLMPGDPLRAKYIAENFLDNAVQVCDVRNMFGYTGTYKGRRISVMGHGMGIPSCSIYVTELIKDYGVKKIIRVGSCGAVNEGIKVRDVVIGMGACTDSKVNRIRFKDHDFAAIADYKMVKAAEEAAKARGIDVKVGNLFSAELFYTPDPSMFDVMDKYGIVGVEMEAAGIYGVAAEYGAKALAICTVSDHIKTGEQTTSEERQNTFNEMIEIALDSVLIGDQ-
7	SP3	3mb8a	0.284	0.987	5.303	threading_7	EVQPHIRLRKEDVEPVVIIVGDPARTEEVAN-MCEKKQELAYNREYRSFRVVYDSQPITVISHGIGCPGTSIAIEELAY-LGAKVIIRAGTCGSLKPTLKQGDVCVTYAAVNETGLIS-NILPEGFPCVATPHVYQALMDAAKELGIEAASGIGVTQDYFYQNGILPKLEMYSKCCDVIDMEMSGVLGLCQARGIATCGILAVDGSPLQWDEATGVKATTGKENMVKITLKACANLRRQ
8	SAM-T99	1oumA	0.979	0.992	4.386	threading_8	-ATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGVGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESV-LLGDK
9	MUSTER	3tl6A	0.467	0.950	3.324	threading_9	CPTPHNGAKYGEIAETVLMAGDPLRVKLLADTYLTDVVQYNSVRGAVGYTGYYKGVKLSVQAHGMGMPSIGIYAYELFNFYGVKRIIRIGSAGAFDESLKLGDIVIGMGACYDSNFERQYDIPGKYSCIADFQLCREAVDAAEKLGYRYKVGNIYSANYFYDDGD-HSGAWKKMGVLAVEMEAAALYMIAARARKQALCMLTISDLCYGSG------EKTKFTQMMEVALSLAK-----
10	SPARKS	3qpba	0.297	0.987	4.863	threading_10	VLQYHLQIRPGDVGRYVIMPGDPKRCAKIAE-HFDNAVLVADSREYVTYTGTLNGEKVSVTSTGIGGPSASIAMEELKL-CGADTFIRVGTCGGIELDVKGGDIVIATGAIRMEGTSK-EYAPIEFPAVADLEVTNALVNAAKKLGYTSHAGVVQCKDAFYGQHLNKWEAWKRLGTKASEMESAALFVAASHLGVRCGSDFLVVGNQERNALGMDNPMAHDTEAAIQVAVEALRTLIEN

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.995 to 1oumA TM-score=0.957 to native SCOP code=c.56.2.1	TM-score=0.965 to 1oumA TM-score=0.962 to native SCOP code=c.56.2.1	TM-score=0.926 to 1odlA TM-score=0.920 to native SCOP code=c.56.2.1	TM-score=0.948 to 1oumA TM-score=0.995 to native SCOP code=c.56.2.1	TM-score=0.940 to 1xe3D TM-score=0.931 to native SCOP code=c.56.2.1

Experimental Structure

Download 1a69A

SCOP code=c.56.2.1