Template-based Modeling Results for DEGS_ECOLI

Submitted Primary Sequence

>Length 355
MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPATN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPATN
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECCHHHCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCEEEEEEEEEEEEECCHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEEEEECCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPATN
3212002000000000000000012122222221232322332211012003300200000102122333323232421000000133000000110023021010002212202000002132100000102232201102011342031010000001112121100100000202222322121100100000021111000010201000000000141231321200000000200130032014212011000000023013200320203322000001014301013130322000010142202202200200230322220201001332312020112323339
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPATN
1	MUSTER	1te0A	0.994	0.896	3.767	threading_1	------------------------------------FDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLIIKATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPAT-
2	SPARKS	3qo6a	0.338	0.868	6.344	threading_2	------------------------------------PKKLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREAATGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGAS---SGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFA--PDQSVEQLGVS---GVLVLDAPPSGPAGKAGLQSGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVTLEPKP---
3	PROSPECT2	3stjA	0.425	0.842	5.554	threading_3	------------------------------------------PLPSLAPMLEKVLPAVVSVRVEG-------TQPFEGLGSGVIIASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGS---VGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDT----S
4	PPA-I	1te0A	0.994	0.896	6.213	threading_4	------------------------------------FDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLIIKATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPAT-
5	HHPRED-l	1te0_A	0.994	0.896	3.621	threading_5	------------------------------------FDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLIIKATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPAT-
6	HHPRED-g	1ky9_A	0.411	0.794	3.763	threading_6	--------------------------------------------PSLAP-LEKV-PSVVSINVEFFG---GQQQKF-ALGSGVIIDADGYVVTNNHVVDNATVIKVQLSDGRKFDAK-VGKDPRSDIALIQIQNPKNLTAIK-ADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSG-----YENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGN---IGIGFAIPSN-VKNLTSQ-VEYGQVKRGELGI-GTELNSELAKA-KVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGT-PVGSKLTLGLLRDGKQVNVNLE--------
7	SP3	3qo6a	0.338	0.868	6.275	threading_7	------------------------------------PKKLQTDELATVRLFQENTPSVVYITNLAVRQDADVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREAATGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGAS---SGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFA--PDQSVEQLGVS---GVLVLDAPPSGPAGKAGLQSGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVTLEPKP---
8	SAM-T99	1te0A	0.994	0.896	4.463	threading_8	------------------------------------FDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLIIKATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPAT-
9	MUSTER	3stjA	0.425	0.842	3.544	threading_9	------------------------------------------PLPSLAPMLEKVLPAVVSVRVEG-------TQPFEGLGSGVIINAKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGS---VGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTS----
10	SPARKS	3pv2a	0.431	0.811	6.219	threading_10	-------------------------------------------MPSMAPVLKNIMPAIVNVAVQGYLPN----RKFESIGSGVIIDPNGVIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKIDAK-NLKSLVIGDSDKLEVGDFVVAIGNPFGLSQSATFGIVSA----------LKNFIQTDAAINPGNSGGALVNAKGELIGINTAILV---------GIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPEFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.925 to 1te0A TM-score=0.976 to native SCOP code=b.36.1.4	TM-score=0.931 to 1te0A TM-score=0.982 to native SCOP code=b.36.1.4	TM-score=0.727 to 2z9iA TM-score=0.686 to native SCOP code=b.36.1.4	TM-score=0.754 to 2z9iA TM-score=0.682 to native SCOP code=b.36.1.4	TM-score=0.925 to 1te0A TM-score=0.976 to native SCOP code=b.36.1.4

Experimental Structure

Download 1te0A

SCOP code=b.36.1.4