Template-based Modeling Results for DEGP_ECOLI

Submitted Primary Sequence

>Length 474
MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCEEEECCHHHCCCCEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHCCCCEEEEEEEECCEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ
452101010000000000002111222322222223321100200331020000010212122323422321321123312213311213212112113223222332222110000000123000000110023021010102212202010003134110000002334401002012132031010000001111132100000000102212313211100100000021111000010201000000000042212100000000200220022014212121000001003013200420503232000001014301013140310000010232202202101100131322220201001322312020202322333232221111031131233233200001102322201212034000001014220320220230033332100010112322020112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ
1	MUSTER	2zleB	0.987	0.835	3.474	threading_1	------------------------------------QMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFG---------------------------GQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGR--------ENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNEMSNK-----GKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLL--
2	SPARKS	3pv2a	0.434	0.793	7.505	threading_2	-------------------------------------MPSMAPVLKNIMPAIVNVAVQGYL--------------------------------------------PNRKFESIGSGVIIDPNNGVIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKID-AKNLKSLVIGDSDKLEVGDFVVAIGNPFGLSQSATFGIVSA----------LKNFIQTDAAINPGNSGGALVNAKGELIGINTAILV------GIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPEDQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQSNNPFLYGLALRAFEQESPPHGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQEKKKELLVQVLRGPGSMYLLVI
3	PROSPECT2	3pv2A	0.441	0.793	5.803	threading_3	M-------------------------------------PSMAPVLKNIMPAIVNVAVQGY--------------------------------------------LPNRKFESIGSGVIIDPNNGVIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKID-AKNLKSLVIGDSDKLEVGDFVVAIGNPFGLSQSATFGIVSA----------LKNFIQTDAAINPGNSGGALVNAKGELIGINTAILV------GIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPEDQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLQSNNPFLYGQESPPHGNVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQEKKKELLVQVLRGPGSMYLLVI
4	PPA-I	2zleB	0.982	0.835	6.380	threading_4	------------------------------------QMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGG---------------------------QQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGR--------ENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNEMSNKG-----KDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLL--
5	HHPRED-l	1ky9_A	0.997	0.629	4.559	threading_5	--------------------------------------PSLAP-LEKV-PSVVSINVEGSTTVNTPR-PRNFQQFFG---------------------------GQQQKF-ALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAK-VGKDPRSDIALIQIQNPKNLTAIK-ADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSG-----YENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSN-VKNLTSQ-VEYGQVKRGELGI-GTELNSELAKA-KVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGT-PVGSKLTLGLLRDGKQVNVNLE-----------------------------------------------------------------------------------------------
6	HHPRED-g	1ky9_A	0.997	0.629	4.422	threading_6	--------------------------------------PSLAP-LEKV-PSVVSINVEGSTTVNTPR-PRNFQQFFG---------------------------GQQQKF-ALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAK-VGKDPRSDIALIQIQNPKNLTAIK-ADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSG-----YENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSN-VKNLTSQ-VEYGQVKRGELGI-GTELNSELAKA-KVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGT-PVGSKLTLGLLRDGKQVNVNLE-----------------------------------------------------------------------------------------------
7	SP3	3pv2a	0.434	0.793	7.719	threading_7	-------------------------------------MPSMAPVLKNIMPAIVNVAVQGYL--------------------------------------------PNRKFESIGSGVIIDPNNGVIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKID-AKNLKSLVIGDSDKLEVGDFVVAIGNPFGLSQSATFGIVSA----------LKNFIQTDAAINPGNSGGALVNAKGELIGINTAILV------GIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPEDQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKNNPFLYGLALRAFEQESPPHGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQEKKKELLVQVLRGPGSMYLLVI
8	SAM-T99	2zleB	0.947	0.835	5.475	threading_8	------------------------------------QMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMP------------------RNFQQFFGGQQQ---------KFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRE--------NFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQ-----NQVDSSSIFNEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLL--
9	MUSTER	3pv2A	0.434	0.793	3.211	threading_9	-------------------------------------MPSMAPVLKNIMPAIVNVAVQGYL--------------------------------------------PNRKFESIGSGVIIDPNNGVIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKID-AKNLKSLVIGDSDKLEVGDFVVAIGNPFGLSQSATFGIVSA----------LKNFIQTDAAINPGNSGGALVNAKGELIGINTAILV------GIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPEFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLNPFLYGLALRAFEQESPPHGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQEKKKELLVQVLRGPGSMYLLVI
10	SPARKS	3qo6a	0.360	0.656	5.847	threading_10	------------------------------PKKLQTDELATVRLFQENTPSVVYITNLAVRQ------------------------DAFTLDVL-------------EVPQGSGSGFVWDKQ-GHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREAATGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFA--PDQSVEQLGVS---GVLVLDAPPSGPAGKAGLQSGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVTLEPKP------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.871 to 2zleB TM-score=0.654 to native SCOP code=b.36.1.4	TM-score=0.901 to 2zleB TM-score=0.666 to native SCOP code=b.36.1.4	TM-score=0.623 to 1lcyA TM-score=0.662 to native SCOP code=b.36.1.4	TM-score=0.617 to 2z9iA TM-score=0.633 to native SCOP code=b.36.1.4	TM-score=0.889 to 2zleB TM-score=0.662 to native SCOP code=b.36.1.4

Experimental Structure

Download 3mh6A

SCOP code=b.36.1.4