Template-based Modeling Results for DEDD_ECOLI

Submitted Primary Sequence

>Length 220
MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPAPVAPPKPKPVEPPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPAPVAPPKPKPVEPPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN
CCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPAPVAPPKPKPVEPPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN
4423123311000000000000001113233332333222022224223433332222223223232332223324223222222322222233232333323223333332333334232332333333322334223223110010020321320220012033221301011122342300000001322332031002202422312010021236
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPAPVAPPKPKPVEPPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN
1	PROSPECT2	1mv3A	0.112	0.855	2.101	threading_1	DG---------------------SPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAG----------RLDLPPGFMFKVQTDTDELQVVLVIPFQNPEEQESDWNQHKKLEKCRGVFTERVP-
2	SPARKS	1x60a	0.190	0.359	1.248	threading_2	--------------------------------------------------------------------------------------------------------------------------------------LKKTSSSGLYKVQIGAFKVKANADSLASNAEAKGFDSIVLLK----DGLYKVQIGAFSSKDNADTLAARAKN-AGFDAIVILES--
3	PROSPECT2	2jl6J	0.185	0.591	1.595	threading_3	AAAA-----------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------------------------------AAAAAAAA----------------------AA
4	PPA-I	1x60A	0.177	0.359	1.754	threading_4	--------------------------------------------------------------------------------------------------------------------------------------LKKTSSSGLYKVQIGAFKVKANADSLASNAEAKGFDSIVLLKD----GLYKVQIGAFSSKDNADTLAARAKNAG-FDAIVILES--
5	PROSPECT2	2l3jA	0.106	0.818	1.562	threading_5	PGPEIKPGLVNKKAKLHAAEKALRSFVQFPNASEAHLAMGRTLSVNTDFTSDQADFPDTLFNGFETPDKSEPPFYVGSNGDDSFSSSGDVSLSASPVPASLTQPPLPIPPPFPPPSGKN----------------------------------------PVMILNELRPGLKYDFLSESGESVMSVVVDGQRNKKLAKARQSALATVFNLHLLEHHHHHH
6	HHPRED-l	1uta_A	0.184	0.345	4.024	threading_6	------------------------------------------------------------------------------------------------------------------------------------------KDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSKITT----NNGWNRVVIGPVKGKENADSTLNRLKM-AGHTNCIRLAAG-
7	PPA-I	1mv3A	0.081	0.782	1.467	threading_7	-----------------------------DGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGT-----------VEGGSGAGRLDLPPGFMFKVQAQHDYTATDT--------DELQLKAGDVVLVIPF
8	HHPRED-g	1uta_A	0.182	0.350	3.758	threading_8	------------------------------------------------------------------------------------------------------------------------------------------KDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSKITT----NNGWNRVVIGPVKGKENADSTLNRLKM-AGHTNCIRLAAGG
9	MUSTER	1mv3A	0.111	0.864	0.910	threading_9	---------------------------DGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPGFMFKVQAQTATDTDEQLDVVLVIPFQNPEEQESDWNQHKKLEKCRGVFPE---N
10	SP3	1x60a	0.190	0.359	1.352	threading_10	--------------------------------------------------------------------------------------------------------------------------------------LKKTSSSGLYKVQIGAFKVKANADSLASNAEAKGFDSIVLLK----DGLYKVQIGAFSSKDNADTLAARAKNA-GFDAIVILES--

Predicted Tertiary Structure


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TM-score=0.322 to 1mv3A SCOP code=b.34.2.1	TM-score=0.322 to 1mv3A SCOP code=b.34.2.1	TM-score=0.464 to 1b24A SCOP code=d.95.2.1	TM-score=0.594 to 1zavA SCOP code=d.58.62.1	TM-score=0.477 to 1b24A SCOP code=d.95.2.1