Template-based Modeling Results for DDPC_ECOLI

Submitted Primary Sequence

>Length 298
MMLSEETSAVRPQKQTRFNGAKLVWMLKGSPLTVTSAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPKAGGKQS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMLSEETSAVRPQKQTRFNGAKLVWMLKGSPLTVTSAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPKAGGKQS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMLSEETSAVRPQKQTRFNGAKLVWMLKGSPLTVTSAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPKAGGKQS
5532332222324432211012002103112210000000000000000021002211210001131210112010101310110000001001101110101101101100010000101101001000100200100010000000011112211000000000100100000101012112110020041010130000011001100000001000100000000000010110031110300000010130023111100000000000000010001001201113222344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMLSEETSAVRPQKQTRFNGAKLVWMLKGSPLTVTSAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPKAGGKQS
1	MUSTER	3dhwA	0.191	0.631	1.062	threading_1	-------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTGQKLYRTVSAIVNIFRSIPFIILLVWMIPFTSIGLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG---------GLGQIGYQYGYINATVMNTVLVLLVILVYLIQFAGD---------------
2	SPARKS	2onkc	0.166	0.789	1.904	threading_2	----------------------------MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLK-------AASD-------PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSALPGIVVAMLFVSVPIYINQAKEGFASV-DVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIA----YYPMIAPTLIYERYLSEGLSPVAAILILLSLAVFVALRIIVG----------------
3	PROSPECT2	1ezfa	0.085	0.943	1.390	threading_3	--------------NSLKTCYKYLNQTSRSFAAVIQNAVCIFYLVLRALDTLEDDMTISVEKKVPLLLYQPDWRFMESKEKDRQVLEDFPTISLEFRKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGTERANSMGLFLQKTNIIRDYLEDQQGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAAYNNQQVFKGPAVKAIIYQY---MEEIYHRIPDSDPSTQN
4	PPA-I	3dhwA	0.186	0.631	4.080	threading_4	-------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPKLYRTVSAIVNIFRSIPFIILLVWMIPFTRIGLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG---------GLGQIGYQYGYINATVMNTVLVLLVILVYLIQFAGD---------------
5	HHPRED-l	3tui_A	0.177	0.681	5.022	threading_5	--------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTNAKLYRTVSAIVNIFRSIPFIILLVWMIPFVGIGLQAAIVPLTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG------GLGQIGYQYGY-IGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR-------
6	HHPRED-g	3tui_A	0.177	0.681	4.875	threading_6	--------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTNAKLYRTVSAIVNIFRSIPFIILLVWMIPFVSIGLQAAIVPLTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG------GLGQIGYQYG-YIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR-------
7	SP3	2onkc	0.173	0.795	1.779	threading_7	----------------------------MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLK-------AASD-------PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSALPGIVVAMLFVSVPIYINQAKEGFASV-DVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIPTLIYERYLSEGLSAA--MPVAAILILLSLAVFVALRIIVG----------------
8	SAM-T99	3dhwA	0.189	0.621	1.441	threading_8	----------------------------------------------------------------------------------------LVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTNAKLYRTVSAIVNIFRSIPFIILLVWMIPFTSIGLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG---------GLGQIGYQYIGYNATVMNTVLVLLVILVYLIQFAGD---------------
9	MUSTER	2onkC	0.189	0.782	1.044	threading_9	------------------------MRLLFSALLALLSSIILLFVLLPVA-ATVT---LQLFNFDEFLK---------SD-------PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSALPGIVVAMLFVSVPIYINQAKEGFASV-DVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIA-Y---YPMIAPTLIYERYLSEGLSAPVAAILILLSLAVFVALRIIG----------------
10	SPARKS	3dhwa	0.186	0.631	1.879	threading_10	-------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVGLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG---------GLGQIGYQYGYINATVMNTVLVLLVILVYLIQFAGD---------------

Predicted Tertiary Structure


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TM-score=0.748 to 3dhwA SCOP code=f.58.1.1	TM-score=0.750 to 3dhwA SCOP code=f.58.1.1	TM-score=0.755 to 2onkC SCOP code=f.58.1.1	TM-score=0.868 to 1ezfB SCOP code=a.128.1.2	TM-score=0.757 to 3dhwA SCOP code=f.58.1.1