Template-based Modeling Results for DDPB_ECOLI

Submitted Primary Sequence

>Length 340
MTFWSILRQRCWGLVLVVAGVCVITFIISHLIPGDPARLLAGDRASDAIVENIRQQLGLDQPLYVQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLELAFGALLLALLIGIPLGILSAVWRNRWLDHLVRIMAITGISTPAFWLGLGVIVLFYGHLQILPGGGRLDDWLDPPTHVTGFYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGIVARQIRSAMLEQLSEDYIRTARASGLPGWYIVLCYALPNALIPSITVLGLALGDLLYGAVLTETVFAWPGMGAWVVTSIQALDFPAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRIGRGGGE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTFWSILRQRCWGLVLVVAGVCVITFIISHLIPGDPARLLAGDRASDAIVENIRQQLGLDQPLYVQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLELAFGALLLALLIGIPLGILSAVWRNRWLDHLVRIMAITGISTPAFWLGLGVIVLFYGHLQILPGGGRLDDWLDPPTHVTGFYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGIVARQIRSAMLEQLSEDYIRTARASGLPGWYIVLCYALPNALIPSITVLGLALGDLLYGAVLTETVFAWPGMGAWVVTSIQALDFPAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRIGRGGGE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTFWSILRQRCWGLVLVVAGVCVITFIISHLIPGDPARLLAGDRASDAIVENIRQQLGLDQPLYVQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLELAFGALLLALLIGIPLGILSAVWRNRWLDHLVRIMAITGISTPAFWLGLGVIVLFYGHLQILPGGGRLDDWLDPPTHVTGFYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGIVARQIRSAMLEQLSEDYIRTARASGLPGWYIVLCYALPNALIPSITVLGLALGDLLYGAVLTETVFAWPGMGAWVVTSIQALDFPAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRIGRGGGE
4400110011000000000000000000020011000110013301321022014301022100100020000002001010132222002102310110122010111212110111011011343311110020001001000000100000000002030010012122222222211011000011211031001001000000000000000000110001003201120010031220321000000000100000000000000100100000000000100010001002211110010000000001000100000001000130032335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTFWSILRQRCWGLVLVVAGVCVITFIISHLIPGDPARLLAGDRASDAIVENIRQQLGLDQPLYVQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLELAFGALLLALLIGIPLGILSAVWRNRWLDHLVRIMAITGISTPAFWLGLGVIVLFYGHLQILPGGGRLDDWLDPPTHVTGFYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGIVARQIRSAMLEQLSEDYIRTARASGLPGWYIVLCYALPNALIPSITVLGLALGDLLYGAVLTETVFAWPGMGAWVVTSIQALDFPAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRIGRGGGE
1	MUSTER	2onkC	0.188	0.721	0.843	threading_1	-------MRLLFSALLALLSSIILLFVLLPV----AATVTLQ---------------LFN---FDEFLKAASD-----------------PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFP-GKSVVEGIVDLPVVIPHTVAGIALLVVFG---GLI---G----------SFSPLKFVDA---------------LPGIVVAMLFVSVPIYINQAKEGFASV-DVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISGAVV---VIA-PMAPTLIYERYLSEGLSA----AMPVAAILILLSLAVFVALRII------VG--
2	SPARKS	3d31c	0.142	0.726	1.272	threading_2	-----------------------------------PLTFVFSFLLLVLFLFIFLTLSNMIFEQITEDFSGLVKAAG-N------------RSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPG-KRLVESIIDVPVVVPHTVAGIALLTVFG-SRGLI--GEPLESYIQFRDALPGIVVAMLFVS------------------------MPYLANSAREGFKS-VDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILYYPMVGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIR----------------
3	PROSPECT2	1ee4a	0.076	0.968	1.570	threading_3	QELPQMTQLSATVKFRQILLQLEAAWALTNIASGTSTKVVVDADAVPLFIQLLYTG---SVEVKEQAIWALGNVAGDSTDYDYVLQCNAMEPILGLFPSLIRTATWTLSWSVVSQALPTLAKLIYSMDTLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHE-------STLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNINTEQIQAVIDANLIPPLVLLEVAEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCI-KPLCDLLEIADNRIIEVTLDALENILKMGEAGMEKIFNCQNDKIYEKAYK
4	PPA-I	3dhwA	0.161	0.547	1.650	threading_4	----------------------------------------------------------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNLLVWMIPFTRVLQAAIVPLTVGAAPFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAV-GAGGLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGD----------------
5	HHPRED-l	3tui_A	0.201	0.615	4.924	threading_5	------------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSI-------------------------------------GLQAAIVPLTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGG-AVGAGGLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR--------
6	HHPRED-g	3tui_A	0.215	0.615	4.912	threading_6	------------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSI----------------------------------GLQAAIVP---LTVGAAPFIARMVENALLE-IPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGG-AVGAGGLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR--------
7	SP3	3tuia	0.230	0.615	1.679	threading_7	------------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVIANAKLYRTVSAIVNIFRSIP-FIILLVWMIPFTRVI-----VG------------TSI--------GLQAA---------IVPLTVGA--APFIARMVENALLEI-PTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAG-GLGQIGYQYGYIGNATVMNTVLVLLVILVYLIQFAGDRIVRAVT---R-----
8	SAM-T99	2qh9A	0.176	0.500	0.774	threading_8	------------------------------------------------------------------------------------------------------------------GNAKKWRFLGIDDSFDDRKCCVVGCVT------------------------CGGYVEGFLYTEIDIDGLDATDKLISVRRSKFREQIKCIFLPGITLGGFNLVDIQRVYR--------ETKIPVVVVRRKPDEEFDSARNLENYELKIVEVAGEIHRI---GDIYIQTAGLTPSEAEKLVKASLIKGNPEPVRISHLVASAIIHG---------------------
9	MUSTER	3d31C	0.180	0.718	0.816	threading_9	------------PLTFVFSFLLLVLFLFIFL----TLSNMI--EQITEDFSGLVKAAG-N------------------------------RSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFP-GKRLVESIIDVPVVVPHTVAGIALLTVFG-------SRGLIGEPLESYIQFRD--------------------ALPGIVVAMLFVSMPYLANSAREGFKSV-DPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISGAVVI--LAYYPMGPTLIYDRFISYGLS----ASRPIAVLLILVTLSIFLVIR------------
10	SPARKS	2onkc	0.140	0.715	1.131	threading_10	--------MRLLFSALLALLSSIILLFVL--LP--VAATVTLQLFNFDEFLKAASD----------------------------------PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGK-SVVEGIVDLPVVIPHTVAGIALLVVFG-------SSGLIGSFSPLKFVDAGIVVAMLFVS------------------------VPIYINQAKEGFAS-VDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISGAVVPMI------APTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG------------

Predicted Tertiary Structure


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TM-score=0.740 to 2onkC SCOP code=f.58.1.1	TM-score=0.404 to 1dowA SCOP code=a.24.9.1	TM-score=0.778 to 3d31C SCOP code=f.58.1.1	TM-score=0.762 to 1ialA SCOP code=a.118.1.1	TM-score=0.690 to 3dhwA SCOP code=f.58.1.1