Template-based Modeling Results for DCUC_ECOLI

Submitted Primary Sequence

>Length 461
MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAIMGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMVVKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRGAAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFWQRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVICMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQSLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAYLTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELMVPGTAAAVTGK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAIMGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMVVKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRGAAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFWQRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVICMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQSLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAYLTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELMVPGTAAAVTGK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAIMGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMVVKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRGAAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFWQRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVICMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQSLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAYLTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELMVPGTAAAVTGK
43300110000000000011002212010000000000000000112311122321211000000200110012200200000000000000022010110002001200330211000000000000000000110100000000000000030100200000000000002100110000100310412010000211000000000000000000221033344222322122322222211111011010000000113221312110000000000000200221322300200210020002000100000000000020010000020001003212202100100100000000101110100000003000300420102001000001001100210020000000001114001120011100100000000000000001022122234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAIMGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMVVKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRGAAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFWQRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVICMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQSLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAYLTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELMVPGTAAAVTGK
1	SPARKS	1gnla	0.156	0.876	1.062	threading_1	TAALQDALIYVTKGLGQIATRLRGKAVERVRMTCAAKKELAASLTDKSGLSDAALWEASEKSAMLAKAGTVGVMATTDRWLITFGLKGMAAYAKHAGKENSLDAFMQEALAKTLDD------SLSVADLVALTL-ETGKFGVSAMALLDAANTGTGHPEITKVNIGSNPGILISGHDLRDLEMLLKQTEGTGVDVYTHSEM--------LPAHYYPAFKKYAHFKGNYGNAWWKQKEEFESFNG--PVLPPKDSYGCKHIPGEIGEHKDF----------SAIIAHAKTCPAPTEIESGEIIHNQVLALADKVIDAVKSGAI--KKFVVMKSRSYYTDFAEGLPKDTVILTAGCAKYRYNLGDIGGAGQCNSYSLAVIALKLKEVFGLEDVND-LPI--------VYNIAKAVIVLLAGVKNIGP-------TLPAFLS------------PNVAKVLVEQ
2	PROSPECT2	1jdha	0.094	0.944	2.083	threading_2	IPELTKLLVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTND------------VETARCTAGTLHNLSHHGLLAIFKSGGIPALVKMLGSPFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILA---YGNQESKLIILALVNIMRTYTYEKLLWTTSRVVCSSNKPAIVEAGGMQALGQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA---GDREDITEPAICALRHLTSRHQEAEMAQNA-------VRLHYGLPVVVKLLHPPSHWPLIKATVGLIRPANHAPLREQGAIPRL-VQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAE
3	PPA-I	1b3uA	0.114	0.952	1.541	threading_3	LLPPLESLATVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFSVCYPRVSSAVKAELRQYFRNLCSD--DTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASQDSVRLLAVEACVNIAQLL--PQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQ--NLMK---DCEAEVRAAASHKVKEFCENL---------SADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECRLNIISNLDCVNEVIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFD----EKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGP
4	PROSPECT2	1b3ua	0.097	0.987	2.027	threading_4	SLYPIAVLIDELNSIKKLSTIALALGVERTR--SELLPFLTDTIYDEDGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVES--LRAISHEHSPSDLEFVPLVKRLAGGDWFTSRTSACGLFSVCFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSAVEACVNIAQLLPQEDLEALVMPTLRQAAMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAA--SHKVKEFCENLSADCRENVIMSQILPCIKELIMGLSPILGKDNTIEHLPLFLAQLKDECPEVRLNIISNDCVNEVIGIRQLSQSLLPAVELAEDAKWRVRLAIILNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHMTTLFCINVLSEVCGQDITTKHMLPTVLRMAAKSLQKIGPILDNSTVLSLA
5	PPA-I	1xm9A	0.082	0.870	1.359	threading_5	YLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPN-------------QNVQQAAAGALRNLVFR-------STTNKLETRRQNGIREAVSLLRRT----GNAEIQKQLTGLLWNLSSKEELIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLSSA--DAGRQTMRNYSG---------------LIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAE----VPTRYRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTAS-KGLMSSGMSQLIGLKE----KGLPQIARLLQ--SGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMW--------SSK
6	PROSPECT2	1w63A	0.106	0.941	1.953	threading_6	MQKECAAIRSSFNVAKLLYMHMLGYPAHFGQLECRIGYLGAMLLLDER---------QDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCRDLAGEVKAALCAVHVIRKVPELMEMFLPAHGVLHTSVVLLTEMCERSPDMLAHFVPQLVRILKNSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLD---------VSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTA-----GSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVA-AWCIGEYGDLLVSGQCEE---EEPIQVTEDEVLDILESVTRGYALTAIMKLSTRFTCTVNRIKEK
7	PPA-I	2jdqB	0.108	0.800	1.329	threading_7	---------------------------------------------------------------TSDMIEMIFS---KSPEQQLSATQKFRKLLSKEPSTPGVVARFVEFLKRKENCTLQFESAWVLTNIAS---GNSLQTRIVIQAGAVPIFIELLSSEEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPN-----DKIQAVIDAGVCRRLVELLMHND-----------YKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPK-----ESIKKEACWTISNITAGNRAQIQTVIDAIFPALISILTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGC--IKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGT
8	PROSPECT2	1ee4a	0.065	0.863	1.906	threading_8	LPQMTQQLEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQP-----------EMLQLEAAWALTNIASGTSAQTKVVV-------DADAVPLFIQLLYTGSVEVK--------EQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLQEAIQAVIDVR------IPKRLVELLSHESTLVQTPALRAVGNI-----VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISN-----------ITAGNTEQIQAVIDANLIPPLVKLLEV-AEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRI---IEVTLDALENILKMGEADKEARGLNINENADFIEKAGMEKIFNCKAYKIIETYF-----------
9	PPA-I	1pw4A	0.097	0.874	1.309	threading_9	YRRLRWQIFLGIFFGYAAYYLVRK------------NFALAMPYLVEQGFSRGDLSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSI--------------AVMFVLLFLCGWFQGMGWPPCGRTMVHWWS-----QKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN--------DWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANV------FVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTA--AGFTGLFGYLGGSVAASA--IVGYTVDFFG---------WDGGFMVMIGGSILAVILLIVVMIGEKRRHEQL
10	PROSPECT2	1xm9A	0.085	0.872	1.902	threading_10	GLT-IPKAVQYLYQAIGAYYIQHDESAKQQVYQLGGICKLVDLLRSPN--------------------QNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSL----LRRTGNAEIQKQLTGLLWNLSSTDELKEELIALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLSSADAGRQTMRNYSG-------------------LIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKG--------LPQIARLLQSGNSDVVRSGASLLSNMS----RHPLLHRVMGNQVFPEVTRLGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNINLCRSSASPKAAEAARLLLSD---MWSSKELQGVL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.546 to 2q6hA SCOP code=f.54.1.1	TM-score=0.741 to 1oa0A SCOP code=e.26.1.1	TM-score=0.659 to 1wa5B SCOP code=a.118.1.1	TM-score=0.839 to 1b3uA SCOP code=a.118.1.2	TM-score=0.925 to 1xm9A SCOP code=a.118.1.24