Template-based Modeling Results for DAPE_ECOLI

Submitted Primary Sequence

>Length 375
MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEECCCEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA
453301210220041302123221001001200340202011021231300001114130000000000011021331211113020221000010000010000000000220122223230200000001132213300120020013233301000001012242111001103200000101020010001113202000110010021012122332231121100000002112212100011010100010024212310121022004324220201010113121224030020002002312423010100010100100131102000001112201212100102102200200120022115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA
1	MUSTER	3ic1A	0.602	0.984	3.436	threading_1	MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGTSPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQG----IQYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIHAGTG--SVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLTKPGKLLDSITSAIEETIGITPKAETGGGTSDGRFIALMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNLLD
2	SPARKS	3pfoa	0.214	0.957	5.297	threading_2	NFNDQVAFLQ-RVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDQVVATAGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWI-GRGAQDKGGVSAIFALDAIRT--AGYAPDARVHVQTVTEEESTG-NGALSTL-----RGYRADACLIPEPT-----GHTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAILHLIRAFEEYTKELNAQAGQVKNPIKFNVGIIKGGDWA-SSTAAWCELDCRLGLLTGDTPQEARGIEKCLADAQATPAELVWSFQADPAVCEPGVAEDVLTAAHKAAFNAPLDARLSTAVNDTRYYSVYGIPALCYGPYGQGPHAFDERIDLESLRKTTLSIALFVAEWCG
3	PROSPECT2	3ic1A	0.602	0.984	5.562	threading_3	MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGTEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQG----IQYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIHAGTG--SVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLTKPGKLLDSITSAIEETIGITPKAETGGGTSDGRFIALMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNLLD
4	PPA-I	3ic1A	0.602	0.984	5.158	threading_4	MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGTSPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQG----IQYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIHAGTG--SVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLTKPGKLLDSITSAIEETIGITPKAETGGGTSDGRFIALMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNLLD
5	HHPRED-l	1vgy_A	0.565	0.981	3.169	threading_5	-TTQSLELAKELISRPSVTPDDRDCQKL-AERLHKIGFAAEE-HFGNTKNIWLRRGKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAAD-KTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPTAVDKLGD-IKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKA-AQELIELGPSNATIHQINENVRLNDIPKLSAVYEGILVRLL-
6	HHPRED-g	1vgy_A	0.565	0.981	3.131	threading_6	-TEQSLELAKELISRPSVTPDDRDCQKL-AERLHKIGFAAEE-HFGNTKNIWLRRGKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAAD-KTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPTAVDKLGD-IKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKA-AQELIELGPSNATIHQINENVRLNDIPKLSAVYEGILVRLL-
7	SP3	3tx8a	0.241	0.928	5.509	threading_7	LLGDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPVEVFRFNN--NVLARTNRGASRVLAGHIDTVPIAD-------NLPSRVEDG-IYGCGTVDKSGLAVYLHTFATLA--TSTELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGEPT-----GGWIEAGCQGNLRIKVTAHGVRAHSARSWLGDNAHK-LSPIISKVAAYKAAEVNILTYREGLNIVFCESGV-ANNVIPD-LAWNLNFRFAPNRDLNEAIEHVVETLELDG-QDGIEWAVEDGAGGALPG-LGQQVTSGLIDAVGREKIRAKFGWTDVSRFSA--GIPALNFGAGDPSFHKRDEQCPVEQITDVAAILKQYLSE---
8	SAM-T99	3ic1A	0.602	0.984	5.650	threading_8	MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGTSPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQGIQ----YPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIHAGT--GSVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLTKPGKLLDSITSAIEETIGITPKAETGGGTSDGRFIALMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNLLD
9	MUSTER	1vgyA	0.558	0.984	3.274	threading_9	TETQSLELAKELISRPSVTPDDRDC-QKLAERLHKIGFAAEE-HFGNTKNIWLRRGKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADK-TSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPTAVDKLGD-IKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKA-AQELIELGPSNATIHQINENVRLNDIPKLSAVYEGILVRLL-
10	SPARKS	3tx8a	0.239	0.928	5.120	threading_10	LLGDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPVEVFRFNN--NVLARTNRGASRVLAGHIDTVPIAD-------NLPSRVEDG-IYGCGTVDKSGLAVYLHTFATLA--TSTELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGEPT-----GGWIEAGCQGNLRIKVTAHGVRAHSARSWLGDNAHK-LSPIISKVAAYKAAEVDGLTYREGLNIVFCESGV-ANNVIPD-LAWNLNFRFAPNRDLNEAIEHVVETLELDGQD-GIEWAVEDGAGGALPG-LGQQVTSGLIDAVGREKIRAKFGWTDVSRFSA--GIPALNFGAGDPSFHKRDEQCPVEQITDVAAILKQYLSE---

Predicted Tertiary Structure


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TM-score=0.825 to 1vgyA SCOP code=c.56.5.4	TM-score=0.830 to 1vgyA SCOP code=c.56.5.4	TM-score=0.754 to 1vgyA SCOP code=c.56.5.4	TM-score=0.827 to 1vgyA SCOP code=c.56.5.4	TM-score=0.825 to 1vgyA SCOP code=c.56.5.4