Template-based Modeling Results for CYSQ_ECOLI

Submitted Primary Sequence

>Length 246
MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLTPDVPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPGFRVSIY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLTPDVPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPGFRVSIY
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCEEEEEEEEECCEEEEEEEEECCCCCEEEEECCCEEEECCCCCEECCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLTPDVPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPGFRVSIY
313101200230020002103223311122222211001001001200020023101300000122232232233221000000010021003411100000000232200000000002210000021100212222122132431430000002212222022002311321000000001000002120100010020010000000000120201001131221211233112111000002
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLTPDVPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPGFRVSIY
1	MUSTER	3lv0A	0.239	0.988	3.341	threading_1	VMNVMVQAAMKAGRSLVRDYGEVQNLQVSLKGPADYVSQADRKAEKIIFNELSKARPKFGFLMEESEEI--IGEDSQHRFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNPINDELFTAERGSGAFFNDRRCRVSARRRLEDCVIATGMPHLPLIELRNVMAEVSGIRRFGTAALDLAYVAAGRTDGFWEDN-LQIWDMAAGILMVREAGGFVTDKEGGNDIFRKKNIIANEHIRIKLE
2	SPARKS	3qmfa	0.188	0.951	5.276	threading_2	IDKLICSWLKQIDNVIPQLIMEMTT--ETKRHRFDLVTNVDKQIQQQFQQFLATYFPEHQLLAENEI---------NHLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDYPHKKLYKAIRGEGAFCNGIKMEEPPSLKLEDAIISFNAQVMNLDTVQDLFDASFSYRLVGACGLDSMRVAKGQFGAHINTN-PKPWDIAAQFLFAELLNLKMTTLDGKAIDHLKGAPFINKACHETVL
3	PROSPECT2	2qflA	0.262	0.963	4.713	threading_3	MLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGE--LEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINICADFRATGSAALDLAYVAAGRVDGFFEIGL-RPWDFAAGELLVREAGGIVSDFTGGHNYMLT------GNIVAGLS
4	PPA-I	3lv0A	0.230	0.988	4.778	threading_4	VMNVMVQAAMKAGRSLVRDYGEVQNLQVSLKGPADYVSQADRKAEKIIFNELSKARPKFGFLMEESEEI--IGEDSQHRFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNPINDELFTAERGSGAFFNDRRCRVSARRRLEDCVIATGMPHLPLIELRNVMAEVSGIRRFGTAALDLAYVAAGRTDGFWEDN-LQIWDMAAGILMVREAGGFVTDKEGGNDIFRKKNIIAGNEHIRIKL
5	HHPRED-l	3b8b_A	0.465	0.935	3.868	threading_5	NA-AAIDAALKAGEKILSIYEDKSDFEI---ADNSPLTIADRKAHEAIVAILNE-TP-FPVLSEEGK--DYVRRGWDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPV-GVIYVPVKKELYFAVEGTGAYK-EKSER-PLADARDHFIAVASRSHLTPETETYIADGNVELISSGS-SIKICLVAEGKADVYPRFAPT-EWDTAAGHAIARAAG-EVYQAKEEPLRYN-KEDLLNPWFIVEA-
6	HHPRED-g	3b8b_A	0.476	0.947	3.399	threading_6	NA-AAIDAALKAGEKILSIYEDKSDFEI---ADNSPLTIADRKAHEAIVAILNE-TP-FPVLSEEGK-DYAVRRGWDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPV-GVIYVPVKKELYFAVEGTGAYK-SKSER-PLADARDHFIAVASRSHLTPETETYIADLGNVELISSGSSIKICLVAEGKADVYPRFAPT-EWDTAAGHAIARAAG-EVYQAKEEPLRYN-KEDLLNPWFIVEAK
7	SP3	3qmfa	0.188	0.951	5.133	threading_7	IDKLICSWLKQIDNVIPQLIMEMT--TETKRHRFDLVTNVDKQIQQQFQQFLATYFPEHQLLAENEI---------NHLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDYPHKKLYKAIRGEGAFCNGIKMEEPPSLKLEDAIISFNAQVMNLDTVQDLFDASFSYRLVGACGLDSMRVAKGQFGAHINTN-PKPWDIAAQFLFAELLNLKMTTLDGKAIDHLKGAPFINKACHETVL
8	SAM-T99	3b8bA	0.455	0.947	4.216	threading_8	-NAAAIDAALKAGEKILSIYED--PKSDFEIADNSPLTIADRKAHEAIVAILNE--TPFPVLSEEG--DYAVRRGWDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPV-GVIYVPVKKELYFAVEGTGAYKQIEKSERPLADARDHFIAVASRSHLTPETETYIADLGNVELISSGSSIKICLVAEGKADVYPRFA-PTEWDTAAGHAIARAAGEVYQAGKEEPLRYNKED-LLNPWFIV---
9	MUSTER	2p3nA	0.230	0.972	3.246	threading_9	RLDFSIKLLRKVGHLLMIHWGRVDNVEKK-TGFKDIVTEIDREAQRMIVDEIRKFFPDENIMAEEGIF-----EKGDRLWIIDPIDGTINFVHGLPNFSISLAYVENGEVKLGVVHAPALNETLYAEEGSGAFFNGERIRVSENASLEECVGSTGSYVFTGKFIERMEKRTRRIRILGSAALNAAYVGAGRVDFFVTWR-INPWDIAAGLIIVKEAGGMVTDFSGKEANAFSKNFIFSNGLIHEVV
10	SPARKS	3luza	0.230	0.935	5.167	threading_10	VMNVMVQAAMKAGRSLVRDYGE------------DYVSQADRKAEKIIFNELSKARPKFGFLMEESEEI--IGEDSQHRFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNPINDELFTAERGSGAFFNDRRCRVSARRRLEDCVIATGMP-TYLIELRNVMAEVSGIRRFGTAALDLAYVAAGRTDGFWEDN-LQIWDMAAGILMVREAGGFVTDKEGGNDIFRKKNIIAGNEHIRIKL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.867 to 1dk4A SCOP code=e.7.1.1	TM-score=0.870 to 1dk4A SCOP code=e.7.1.1	TM-score=0.835 to 1dk4A SCOP code=e.7.1.1	TM-score=0.817 to 1dk4A SCOP code=e.7.1.1	TM-score=0.868 to 1dk4A SCOP code=e.7.1.1