Template-based Modeling Results for CYSP_ECOLI

Submitted Primary Sequence

>Length 338
MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKGKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLAAGRN
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKGKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLAAGRN
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCEEEECCCCCEEECCEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEHHHHHCCHHHHHHHHHCCCCEEEHHHCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKGKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLAAGRN
43231011000000000000022322200000110123002100310131024222232020211221223101112311401000001220021023223112221223123320100000000023212330320310132302000132321110101000000000423222322022001201410201231032001100331201000001020010132243320100014210102110001242232321330031002101023001101211121223300221333133221010123011032003211221010021122346
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKGKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLAAGRN
1	MUSTER	1sbpA	0.456	0.914	2.964	threading_1	-----------------------KDIQLLNVSYDPTRELYEQYNKAFSAHWKQ-ETGDNVVIDQSHGGSGKQATSVINGIEADTVTLALAYDVNAIAERG-RIDKNWIKRLPDDSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAEDFVKALFKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEIVTPSESILAEPTVSVVDKVVEKKDTKAVAEAYLKYLYSPEGQEIAAKNFYRPRDADVAKKYDDAFPKLKLFTIDEVFGGWAKAQKDHFADGGTFDQISK----
2	SPARKS	1sbp_	0.456	0.914	6.676	threading_2	-----------------------KDIQLLNVSYDPTRELYEQYNKAFSAHWKQ-ETGDNVVIDQSHGGSGKQATSVINGIEADTVTLALAYDVNAIAERG-RIDKNWIKRLPDDSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAEDFVKALFKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEIVTPSESILAEPTVSVVDKVVEKKDTKAVAEAYLKYLYSPEGQEIAAKNFYRPRDADVAKKYDDAFPKLKLFTIDEVFGGWAKAQKDHFADGGTFDQISK----
3	PROSPECT2	1sbp_	0.456	0.914	4.207	threading_3	-----------------------KDIQLLNVSYDPTRELYEQYNKAFSAHWKQ-ETGDNVVIDQSHGGSGKQATSVINGIEADTVTLALAYDVNAIAERG-RIDKNWIKRLPDDSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAEDFVKALFKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEIVTPSESILAEPTVSVVDKVVEKKDTKAVAEAYLKYLYSPEGQEIAAKNFYRPRDADVAKKYDDAFPKLKLFTIDEVFGGWAKAQKDHFADGGTFDQIS----K
4	PPA-I	1sbpA	0.456	0.914	3.652	threading_4	-----------------------KDIQLLNVSYDPTRELYEQYNKAFSAHWKQ-ETGDNVVIDQSHGGSGKQATSVINGIEADTVTLALAYDVNAIAERG-RIDKNWIKRLPDDSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAEDFVKALFKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEIVTPSESILAEPTVSVVDKVVEKKDTKAVAEAYLKYLYSPEGQEIAAKNFYRPRDADVAKKYDDAFPKLKLFTIDEVFGGWAKAQKDHFADGGTFDQISK----
5	HHPRED-l	1sbp_A	0.453	0.914	4.574	threading_5	-----------------------KDIQLLNVSYDPTRELYEQYNKAFSAHWKQE-TGDNVVIDQSHGGSGKQATSVINGIEADTVTLALAYDVNAIAERGRI-DKNWIKRLPDDSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAEDFVKALFKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEIVTPSESILAEPTVSVVDKVVEKKDTKAVAEAYLKYLYSPEGQEIAAKNFYRPRDADVAKKYDDAFPKLKLFTIDEVFGGWAKAQKDHFADGGTFDQISK----
6	HHPRED-g	1sbp_A	0.460	0.914	7.355	threading_6	-----------------------KDIQLLNVSYDPTRELYEQYNKAFSAHW-KQETGDNVVIDQSHGGSGKQATSVINGIEADTVTLALAYDVNAIAERG-RIDKNWIKRLPDDSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAEDFVKALFKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEIVTPSESILAEPTVSVVDKVVEKKDTKAVAEAYLKYLYSPEGQEIAAKNFYRPRDADVAKKYDDAFPKLKLFTIDEVFGGWAKAQKDHFADGGTFDQISK----
7	SP3	1sbp_	0.456	0.914	6.743	threading_7	-----------------------KDIQLLNVSYDPTRELYEQYNKAFSAHWKQ-ETGDNVVIDQSHGGSGKQATSVINGIEADTVTLALAYDVNAIAERG-RIDKNWIKRLPDDSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAEDFVKALFKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEIVTPSESILAEPTVSVVDKVVEKKDTKAVAEAYLKYLYSPEGQEIAAKNFYRPRDADVAKKYDDAFPKLKLFTIDEVFGGWAKAQKDHFADGGTFDQISK----
8	SAM-T99	1sbpA	0.456	0.914	9.107	threading_8	-----------------------KDIQLLNVSYDPTRELYEQYNKAFSAHW-KQETGDNVVIDQSHGGSGKQATSVINGIEADTVTLALAYDVNAIAERGRID-KNWIKRLPDDSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAEDFVKALFKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEIVTPSESILAEPTVSVVDKVVEKKDTKAVAEAYLKYLYSPEGQEIAAKNFYRPRDADVAKKYDDAFPKLKLFTIDEVFGGWAKAQKDHFADGGTFDQISK----
9	MUSTER	1sbpA2	0.503	0.464	1.352	threading_9	-----------------------------------------------------------------------------------------------------------------------STIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAEDFVKALFKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLATNELGKDKFEIVTPSESILAL----------------------------------------------------------KLFTIDEVFGGWAKAQKDHFADGGTFDQISK----
10	SPARKS	3fira	0.152	0.680	2.763	threading_10	--------------------------DVNLYGPGGPHTALKDIANKYSEKT-----GVKVNVNF--GPQATWFEKAKKD--ADILFGASDQSALAISDFGKDFNVSKIK------PLYFREAIILTQKGNPLKIKGLKDLANKKVRIVV--PEGAGESNTSGTGVWEDMIGRTQD-----IKTIQNFRNNIVAFVPNSGSARK-LFAQDQADAWITWIDWSKS-----NPDIGTAVAIEK----DLVVYRTFNVIAKEGASKETQDFIAYLSSKEAKEIFKKYGWREH--------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.957 to 1sbpA SCOP code=c.94.1.1	TM-score=0.956 to 1sbpA SCOP code=c.94.1.1	TM-score=0.957 to 1sbpA SCOP code=c.94.1.1	TM-score=0.956 to 1sbpA SCOP code=c.94.1.1	TM-score=0.957 to 1sbpA SCOP code=c.94.1.1