Template-based Modeling Results for CYSN_ECOLI

Submitted Primary Sequence

>Length 475
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
CCCHHHHHHCCCCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHCCCEEEEEEEEECCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCEECCCCCEEECCCCCCCCCHHCEEEEEEECCCCCCCCCCEEEEECCCEEEEEEEEHHEEECCCCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
5332202312331103101223333200000000112301000001001203201330022012105421332340100000111211341100000001102242110000100001200201011001000000001043110210210010021010200000001111140123002201310120033022223010000000301201130320211201100200210323422423201000000021221010100101002012122020012212020110110213133011110000001211102200000104311321320100000003220231210001010210201011010102232223331430322100001010231000131321221000000012210000000011012322223231110111011103421011103212244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
1	MUSTER	1zunB	0.588	0.802	3.712	threading_1	------------------LG-QHERKELRFLTCGNVDDGKSTLIGRLLHDSKIG---------------------DDLALLVDGLQA------TIDVAYRYFSTAKRKFIIADTPGHEQYTRNA-TGASTCDLAIILVDARYGVQTQTRRHSYIASLLGIKHIVVAINK-DLNGFDERVFESIKADYLKFAEGIAFKP-TTAFVPSALKGDNVVNKSERSPWYAGQSL-EILETVEIASDRNYTDLRFPVQYVNRPNLNFRGFAGTLASGIVHKGDEIVVLPSGKSSRVKSIVTFEGELEQAGPGQAVTLTE-DEIDISRGDLLVHADNVPQVS-DAFDALVWA-EEP-LPGKKYDIKRATSYVPGSIASITHRVDVNTLEEGPASSLQLNEIGRVKVSLDAPIALDGYSSNRTTGAFIVIDRLTNGTVAAGIIA----------------------------------------
2	SPARKS	1f60a	0.280	0.872	7.137	threading_2	---------------------GKEKSHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKG--SFKYAWVLDKLKAERERGITIDIALWKFETPKYQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEQTREHALLAFTLGVRQLIVAVNKMDSVKWDESRFQEIVKETSNFIKKVGYNPKVPFVPISGWNGDNMIEATTNAPWYKGKTLLEAIDAIEQPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPAGVTTEVKSVEMHHEQLEQGVPGDNVGFNVKNVKEIRRGNVCGDAKNDPPKGCASFNATVIVLNHPGQIGYSPVLDCHTAHIACRFDELLEKNDRRSGKEDHPKFLKSGDAALVKFVPSKPMCVEAFSEYPPLGRFAVRDMRQ--TVAVGVI-KSVDK-----------------------------------
3	PROSPECT2	1zunB	0.579	0.804	4.450	threading_3	LG-------------------QHERKELRFLTCGNVDDGKSTLIGRLLHDSK---------------------IGDDLALLVDGLQ-----AITIDVAYRYFSTAKRKFIIADTPGHEQYTRNA-TGASTCDLAIILVDARYGVQTQTRRHSYIASLLGIKHIVVAINKDL-NGFDERVFESIKADYLKFAEGIAFKPTTAFVP-SALKGDNVVNKSERSPWYAGQSL-EILETVEIASDRNYTDLRFPVQYVNRPNLNFRGFAGTLASGIVHKGDEIVVLPSGKSSRVKSIVTFEGELEQAGPGQAVTLT-EDEIDISRGDLLVHADNVPQVSDAFDALVWAEEPLP---GKKYDIKRATSYVPGSIASITHRVDVNTLEEGPASSLQLNEIGRVKVSLDAPIALDGYSSNRTTGAFIVIDRLTNGTVAAGII----------------------------------------A
4	PPA-I	1zunB	0.576	0.804	8.215	threading_4	-------------------LGQHERKELRFLTCGNVDDGKSTLIGRLLHDSKIG---------------------DDLALLVDGLQAI-----TIDVAYRYFSTAKRKFIIADTPGHEQYTRNA-TGASTCDLAIILVDARYGVQTQTRRHSYIASLLGIKHIVVAINK-DLNGFDERVFESIKADYLKFAEGIAFKP-TTAFVPSALKGDNVVNKSERSPWYAGQSL-EILETVEIASDRNYTDLRFPVQYVNRPNLNFRGFAGTLASGIVHKGDEIVVLPSGKSSRVKSIVTFEGELEQAGPGQAVTLTEDE-IDISRGDLLVHADNVPQVSDAF-DALVWAEEP--LPGKKYDIKRATSYVPGSIASITHRVDVNTLEEGPASSLQLNEIGRVKVSLDAPIALDGYSSNRTTGAFIVIDRLTNGTVAAGIIA----------------------------------------
5	HHPRED-l	1zun_B	0.603	0.800	4.012	threading_5	------------------LGQHERKE-LRFLTCGNVDDGKSTLIGRLLHDSK--------------------GDD--LALLVDGLQA-----ITIDVAYRYFSTAKRKFIIADTPGHEQYTRN-ATGASTCDLAIILVDARYGVQTQTRRHSYIASLLGIKHIVVAINK-DLNGFDERVFESIKADYLKFAEGIAFKPT-AFVP-SALKGDNVVNKSERSPWYAGQSL-EILETVEIASDRNYTDLRFPVQYVNRPNLNFRGFAGTLASGIVHKGDEIVVLPSGKSSRVKSIVTFEGELEQAGPGQAVTLT-EDEIDISRGDLLVHADNVPQVSDAFDA-LVW-AEEP-LPGKKYDIKRATSYVPGSIASITHRVDVNTLEEGPASSLQLNEIGRVKVSLDAPIALDGYSSNRTTGAFIVIDRLTNGTVAAG-IIA---------------------------------------
6	HHPRED-g	1zun_B	0.603	0.800	4.040	threading_6	------------------LGQHERKE-LRFLTCGNVDDGKSTLIGRLLHDSK--------------------GDD--LALLVDGLQA-----ITIDVAYRYFSTAKRKFIIADTPGHEQYTRN-ATGASTCDLAIILVDARYGVQTQTRRHSYIASLLGIKHIVVAINK-DLNGFDERVFESIKADYLKFAEGIAFKTT-AFVP-SALKGDNVVNKSERSPWYAGQSL-EILETVEIASDRNYTDLRFPVQYVNRPNLNFRGFAGTLASGIVHKGDEIVVLPSGKSSRVKSIVTFEGELEQAGPGQAVTLT-EDEIDISRGDLLVHADNVPQVSDAFDA-LVW-AEEP-LPGKKYDIKRATSYVPGSIASITHRVDVNTLEEGPASSLQLNEIGRVKVSLDAPIALDGYSSNRTTGAFIVIDRLTNGTVAAG-IIA---------------------------------------
7	SP3	1f60a	0.280	0.872	6.723	threading_7	---------------------GKEKSHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKG--SFKYAWVLDKLKAERERGITIDIALWKFETPKYQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEQTREHALLAFTLGVRQLIVAVNKMDSVKWDESRFQEIVKETSNFIKKVGYNPKVPFVPISGWNGDNMIEATTNAPWYKGKTLLEAIDAIEQPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPAGVTTEVKSVEMHHEQLEQGVPGDNVGFNVKNVKEIRRGNVCGDAKNDPPKGCASFNATVIVLNHPGQIGYSPVLDCHTAHIACRFDELLEKNDRRSGKEDHPKFLKSGDAALVKFVPSKPMCVEAFSEYPPLGRFAVRDMRQ--TVAVGVI-KSVDK-----------------------------------
8	SAM-T99	3agjA	0.312	0.878	4.767	threading_8	------------------------KPHMNLVVIGHVDHGKSTLVGHLLYRLGYIEEKKLKELEEQAKSRGK--ESFKFAWILDKMKEERERGITIDLTFMKFETKKYVFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEQTREHLLLARTMGIEQIIVAVNKMDAVNYDQKRYEFVVSVLKKFMKGLGYQVKIPFIPVSAWKGDNLIERSPNMPWYNGPTLVEALDQLQPPAKPVDKPLRIPVQNVYSIPGAGTVPVGRVETGVLRVGDKVVFMPPGVVGEVRSIEMHYQQLQQAEPGDNIGFAVRSKSDIKRGDVAGHLDKPPTVAEEFEARIFVIWHPSITVGYTPVIHVHTASVSSRIIEIKAKLDPKTGQEQNPQFLKAGDAAIVRFKPVKPLVVEKFSEIPQLGRFAMRDM--NRTVGIGIVTDVKPAKVDIK------------------------------
9	MUSTER	3agjA	0.321	0.872	3.120	threading_9	------------------------KPHMNLVVIGHVDHGKSTLVGHLLYRLGYIEEKKLKELEEQAKSRGKE--SFKFAWILDKMKEERERGITIDLTFMKFETKKYVFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGE--QTREHLLLARTMGIEQIIVAVNKMDAVNYDQKRYEFVVSVLKKFMKGLGYQVDIPFIPVSAWKGDNLIERSPNMPWYNGPTLVEALDQLQPPAKPVDKPLRIPVQNVYSIPGAGTVPVGRVETGVLRVGDKVVFMPPGVVGEVRSIEMHYQQLQQAEPGDNIGFAVRGKSDIKRGDVAG-HLDKPPTVAEEFEARIFVIWHPSAIGYTPVIHVHTASVSSRIIEIKAKLDPKTGQEQNPQFLKAGDAAIVRFKPVKPLVVEKFSEIPQLGRFAMRDMNR--TVGIGIVTD-VKPAKVDIK-----------------------------
10	SPARKS	1zunb	0.573	0.804	6.526	threading_10	-------------------LGQHERKELRFLTCGNVDDGKSTLIGRLLHDSKI---------------------GDDLALLVDGLQ-----AITIDVAYRYFSTAKRKFIIADTPGHEQYTRNAT-GASTCDLAIILVDARYGVQTQTRRHSYIASLLGIKHIVVAINKDL-NGFDERVFESIKADYLKFAEGIAFKPTTAFVP-SALKGDNVVNKSERSPWYAGQSL-EILETVEIASDRNYTDLRFPVQYVNRPNLNFRGFAGTLASGIVHKGDEIVVLPSGKSSRVKSIVTFEGELEQAGPGQAVTLTEDEI-DISRGDLLVHADNVPQVSDA-FDALVWAEEP--LPGKKYDIKRATSYVPGSIASITHRVDVNTLEEGPASSLQLNEIGRVKVSLDAPIALDGYSSNRTTGAFIVIDRLTNGTVAAGIIA----------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.895 to 1zunB SCOP code=b.43.3.1	TM-score=0.893 to 1zunB SCOP code=b.43.3.1	TM-score=0.898 to 1g7cA SCOP code=b.43.3.1	TM-score=0.891 to 1zunB SCOP code=b.43.3.1	TM-score=0.895 to 1zunB SCOP code=b.43.3.1