Template-based Modeling Results for CYSI_ECOLI

Submitted Primary Sequence

>Length 570
MSEKHPGPLVVEGKLTDAERMKHESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSEKHPGPLVVEGKLTDAERMKHESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
CCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSEKHPGPLVVEGKLTDAERMKHESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
554433232223241132210333233021201210232132213221020021111132312311222032312332000000101122011310200020023123201020012210102201331032003102311120121023012100000112123212101300320032012212200201122331112232211232201220100011023111212000000000023332100000000011132223311120022002012310020020002002210221222111021003301131022102331223132121231213112100010133110000002112123221310110011004213020200121100002033211230131033122222222111000000112102101110230021002101301232222332010100001100030211100000112210100001232212112001230222100200220011013224222100200220112231122122125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSEKHPGPLVVEGKLTDAERMKHESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
1	MUSTER	2gepA	1.000	0.828	3.156	threading_1	--------------------------------------------------------------------------------LLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRT------------------EPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
2	SPARKS	1aop_	0.991	0.800	9.022	threading_2	--------------------------------------------------------------------------------LLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGI-----LPVHQMLHSVGLDA---LNDMNRNVLCTSNPYESQLHAEAYEWAKKISEH--------------------------LLPTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
3	PROSPECT2	1zj8A	0.227	0.912	4.637	threading_3	---RNEGQWGHREPLNANEELKKAGNPLRERIENIYAKQGFDSIDKTDLRRFRWWGLYTQREQGYDGTWTGDDNIDKKYFMMRVRCDGGALSAAALRTLGQISTEFA-RDTADISDRQNVQYHWIEVENVPEIWRRLDDVGLQTTEACGDCPRVVLG--SPLAGESLDEVTWAIEEIVRRYIGKPDF----------------------ADLPRKYKTAISGLQDVAHE--INDVAFIGVNHPEHGPGLDLWVGGGLSTN-------PMLAQRVGWVPLGEVPEVWAAVTSVFRDYGYRRLRAKARLKFLIKDWGIAKFREVLETEYLKRPLGPAPEPVKHPIDHVGVQRLKNGLNAVGVAPIAGRVS----GTILTAVADLMAAGSDRIRFTPYQKLVILDIPDALLDDLIAGLDALGLQSRPSHWRRNLMACSGIEFCKLSFAETRVRAQHLVPELERRLEDINSQDVPITVNINGCPNSCARIQIADIGFKGQSVEGFQVHLGGGLDAGFGRKLRQHKVTSDELGDYIDRVVRNFVKHRSEGERFAQWVIRAEE---------DDLR
4	PPA-I	2gepA	1.000	0.828	4.823	threading_4	--------------------------------------------------------------------------------LLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRT------------------EPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
5	HHPRED-l	1zj8_A	0.234	0.900	7.425	threading_5	---------ALGHPLNANEELKKAGNPLRERIENYAKQGFD-SIDKTDLGRFRWWGLYTQREQTWTGDDNIDKLEAKY-FMMRVRCDGGALSAAALRTLGQISTE-FARDTADISDRQNVQYHWIEVENVPEIWRRLDDVGLQTTEACGDCPRVVLGS--PLAGESLDEVLDPTWAIVRRYI----------------------GKPDFADLPRKYKTAISGLQDVAH--EINDVAFIGVNHPEHGPGLDLWVGGGLSTNPMLAQRV------GAWVPLGEVPEVWAAVTSVFRDYGYRRLRAKARLKFLIKDWGIAKFREVLETEYLKRIDGPAPEPVKHPIDHVGVQRLKNGLNAVGVAPIAGRVSGTILTA----VADLMAAGSDRIRFTPYQKLVILDIPDALLDDLIAGLDALGLQSRPSHWRRNLMACSGIEFCKLSFAETRVRAQHLVPELERRLEDINQLDVPITVNINGCPNSCARIQIADIGFKGQSVEGFQVHLGGHLGDAGFGRKLQHKVTSDELGDYIDRVVRNFVKHRSEGERFAQWVIRAEEDD--L---R----
6	HHPRED-g	2akj_A	0.243	0.882	7.017	threading_6	RVEERDGFWVLRSGINPAEKVKIEKDPMKLFIEDGISDLATLSMEEVD------KSKHNKDDIDVRLKWLHRRKHHYGRFMMRLKLPNGVTTSEQTRYLASVIKKYGKDGCADVTTRQNWQIRGVVLPDVPEIIKGLESVGLTSLQSGMDNVRNPVGNPLAG--------------IDPHEIVDTRPFTNLISQF---VTANSRGNLSITNLPRKWNPCVIGSHDLYEHPHINDLAYMPATKNGKF-GFNLLVGGFFSIKRCEEAI-----PLDAWVSAEDVVPVCKAMLEAFRDLGFRGNRQKCRMMWLIDELGMEAFRGEVEKRMPEQVLERASSKDWERREYLGVHPQQQGLSFVGLHIPVGRLQAD----EMEELARIADVGSGELRLTVEQNIIIPNVENSKIDSLLNEPLLKRYSPEPPILMKGLVACTGSQFCGQAIIETKARALKVTEEVQRLVS----VTRPVRMHWTGCPNSCGQVQVADIGFMGKPCEGADVFVGGRISDSHLGDIYKKAVPCKDLVPVVAEILGAVPR------------------------------
7	SP3	1aop_	0.993	0.800	8.758	threading_7	--------------------------------------------------------------------------------LLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGI-----LPVHQMLHSVGLD---ALNDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLP--------------------------TYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
8	SAM-T99	2gepA	1.000	0.828	6.783	threading_8	--------------------------------------------------------------------------------LLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRT------------------EPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
9	MUSTER	1zj8A	0.243	0.918	2.871	threading_9	---RNEGQWALGEPLNANEELKKAGNPLRERIENIYAKQGFDSIDKTDLRRFRWWGLYTQREQGYDGTWNIDKLEA-KYFMMRVRCDGGALSAAALRTLGQISTEFA-RDTADISDRQNVQYHWIEVENVPEIWRRLDDVGLQTTEACGDCPRVVLG--SPLAGESLDE-----------VLDPTWAIEEIVR----RYIGKPD----FADLPRKYKTAISGL--QDVAHEINDVAFIGVNHPEHGPGLDLWVGGGLSTN-------PMLAQRVGWVPLGEVPEVWAAVTSVFRDYGYRRLRAKARLKFLIKDWGIAKFREVLETEYLKRIDGPAPEPVKHPIDHVGVQRLKNGLNAVGVAPIAGRVSG---TILTAVADLMARAGSDRIRFTPYQKLVILDIPDALLDDLIAGLDALGLQSRPSHWRRNLMACSGIEFCKLSFAETRVRAQHLVPELERRLEDINQLDVPITVNINGCPNSCARIQIADIGFKGQMVEGFQVHLGGHLLDAGFGRKLQHKVTSDELGDYIDRVVRNFVKHRSEGERFAQWVIRAEEDDLR---------
10	SPARKS	1zj8a	0.240	0.919	7.901	threading_10	---RNEGQWALGEPLNANEELKKAGNPVRERIENIYKQGFDSIDKTDLRGRFRWWGLYTQREQGYDGTWTGDDNIDAKYFMMRVRCDGGALSAAALRTLGQISTEFA-RDTADISDRQNVQYHWIEVENVPEIWRRLDDVGLQTTEACGDCPRVVLGS--PLAGESLDEVLD-----------PTWAIEEIVRRYI------GKPDFA--DLPRKYKTAIS--GLQDVAHEINDVAFIGVNHPEHGPGLDLWVGGGLS-------TNPMLAQRVGWVPLGEVPEVWAAVTSVFRDYGYRRLRAKARLKFLIKDWGIAKFREVLETEYLKRPLIDAPEPVKHPIDHVGVQRLKNGLNAVGVAPIAGRVSG---TILTAVADLMARAGSDRIRFTPYQKLVILDIPDALLDDLIAGLDALGLQSRPSHWRRNLMACSGIEFCKLSFAETRVRAQHLVPELERRLEDINSQDVPITVNINGCPNSCARIQIADIGFKGQMIEGFQVHLGGGLDAGFGRKLRQHKVTSDELGDYIDRVVRNFVKHRSEGERFAQWVIRAEEDDLR---------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.914 to 2gepA TM-score=1.000 to native SCOP code=d.58.36.1	TM-score=0.914 to 2gepA TM-score=1.000 to native SCOP code=d.58.36.1	TM-score=0.897 to 2gepA TM-score=0.981 to native SCOP code=d.58.36.1	TM-score=0.923 to 1zj8A TM-score=0.874 to native SCOP code=d.58.36.1	TM-score=0.914 to 2gepA TM-score=1.000 to native SCOP code=d.58.36.1

Experimental Structure

Download 2gepA

SCOP code=d.58.36.1