Template-based Modeling Results for CYSE_ECOLI

Submitted Primary Sequence

>Length 273
MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLSSPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLSSPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCCEECCCEEECCCCEEEECCCEEECCCCEECCCCEECCCCCCCCCCCCEECCCEEECCCCEEECCEEECCCCEECCCEEEEEECCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLSSPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI
442321220122012101211432110010010001413200100000002201232121200120022003202300200010011033212103210000000300100000000000122223000100110010000000121020030000110000000210101310100200000121322132002022000000002000201003002001000001102320100101021023332333223232202013222322334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLSSPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI
1	MUSTER	3gvdI	0.859	0.985	4.166	threading_1	MSSEELEQVWSNIKSEARALAECEPMLASFFHATLLKHENLGSALSYILANKLANPIMPAIAIREVVEEAYRSDAHMIVSAARDILAVRLRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWAQDRKALAIYLQNQVSVAFGVDIHPAATIGCGIMLDHATGIVIGETAVVENDVSILQSVTLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQSVPAHTTAAGVPARIVGKPESDKPSLDMDQHFNGSIQGFEY----
2	SPARKS	1ssma	0.740	0.861	4.938	threading_2	-----TLDVWQHIRQEAKELAENEP-LASFFHSTILKHQNLGGALSYLLANKLANP-IPAISLREIIEEAYQSNPSIIDCAACDIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNRKSLALYLQNQISVAFDVDIHPAAKIGHGIF-DHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRHPKVREGV-IGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV-----------------------------
3	PROSPECT2	3mc4A	0.521	0.886	6.265	threading_3	AGLDQVDPIWHSIRAEAEEATRNDPVLGAFLYATILNQPSLEEAVMHRIAERLGHPDVSADILRQTFDTMLEANPEWSHVLRVDIQAVYDRDPAYSRFMDPVLYLKGFHAIQTHRLAHWLYKQGRKDFAYYLQSRSSSIFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGG-----GDRHPKIRQGVLIGAGAKILGNIQVGQ-SKIAAGSVVLKSVPHNVTVAGVPARIIGETG-------------------------
4	PPA-I	3gvdI	0.859	0.985	5.846	threading_4	MSSEELEQVWSNIKSEARALAECEPMLASFFHATLLKHENLGSALSYILANKLANPIMPAIAIREVVEEAYRSDAHMIVSAARDILAVRLRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWAQDRKALAIYLQNQVSVAFGVDIHPAATIGCGIMLDHATGIVIGETAVVENDVSILQSVTLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQSVPAHTTAAGVPARIVGKPESDKPSLDMDQHFNGSIQGFEY----
5	HHPRED-l	1t3d_A	1.000	0.923	6.098	threading_5	-SCEELEIVWNNIKAEARTLADCEP-LASFYHATLLKHENLGSALSY-LANKLSSPI-PAIAIREVVEEAYAADPE-IASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGI-LDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGV-IGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPS-D--QHFNG-----------
6	HHPRED-g	1t3d_A	1.000	0.923	6.032	threading_6	-SCEELEIVWNNIKAEARTLADCEP-LASFYHATLLKHENLGSALSY-LANKLSSPI-PAIAIREVVEEAYAADPE-IASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGI-LDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGV-IGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPS-D--QHFNG-----------
7	SP3	1ssma	0.740	0.861	4.487	threading_7	-----TLDVWQHIRQEAKELAENEP-LASFFHSTILKHQNLGGALSYLLANKLANP-IPAISLREIIEEAYQSNPSIIDCAACDIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNRKSLALYLQNQISVAFDVDIHPAAKIGHGIF-DHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRHPKVREGV-IGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV-----------------------------
8	SAM-T99	3gvdI	0.859	0.985	6.846	threading_8	MSSEELEQVWSNIKSEARALAECEPMLASFFHATLLKHENLGSALSYILANKLANPIMPAIAIREVVEEAYRSDAHMIVSAARDILAVRLRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWAQDRKALAIYLQNQVSVAFGVDIHPAATIGCGIMLDHATGIVIGETAVVENDVSILQSVTLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQSVPAHTTAAGVPARIVGKPESDKPSLDMDQHFNGSIQGFEY----
9	MUSTER	3mc4A	0.521	0.886	4.011	threading_9	AGLDQVDPIWHSIRAEAEEATRNDPVLGAFLYATILNQPSLEEAVMHRIAERLGHPDVSADILRQTFDTMLEANPEWSHVLRVDIQAVYDRDPAYSRFMDPVLYLKGFHAIQTHRLAHWLYKQGRKDFAYYLQSRSSSIFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGG-----GDRHPKIRQGVLIGAGAKILGNIQVGQ-SKIAAGSVVLKSVPHNVTVAGVPARIIGETG-------------------------
10	SPARKS	3p1ba	0.295	0.857	4.859	threading_10	----AMDNYIYSIAHQLYEMYLQDELRKIFFPDFFMKHQKITESHIASELTKLVDAYNDELFAHQCVMAILEKLPSIKRTLKTDLIAAYAGDPAAPGLSLIIRCYPGFQAVIVYRIAHVLYECGERYYCREMMESVHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHKRGTKRHPTVGDYVTIGTGAKVLGNIIVGSHVRIGANCWIDRDVDSNQTVYI-----------------------------------

Predicted Tertiary Structure


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TM-score=0.547 to 1hm8A TM-score=0.994 to native SCOP code=b.81.1.4	TM-score=0.547 to 1hm8A TM-score=0.994 to native SCOP code=b.81.1.4	TM-score=0.551 to 1hm8A TM-score=0.922 to native SCOP code=b.81.1.4	TM-score=0.537 to 1hm8A TM-score=0.929 to native SCOP code=b.81.1.4	TM-score=0.547 to 1hm8A TM-score=0.994 to native SCOP code=b.81.1.4

Experimental Structure

Download 1t3dA

SCOP code=b.81.1.4