Template-based Modeling Results for CYOE_ECOLI

Submitted Primary Sequence

>Length 296
MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLVGVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLWFGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDSGAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAVATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALSVMMSVDFMVPDSHTLLAAVW
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLVGVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLWFGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDSGAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAVATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALSVMMSVDFMVPDSHTLLAAVW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLVGVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLWFGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDSGAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAVATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALSVMMSVDFMVPDSHTLLAAVW
43021012102000000000000000000031111000000000000000000000010021301231321332211312012100000000000000000000000000000000000000000101322221010000000000000000001031200000000000000000000000111320220303000122022002100000000000000000001100000000000000000000020131233221012000000000000000000010012222001112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLVGVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLWFGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDSGAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAVATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALSVMMSVDFMVPDSHTLLAAVW
1	SPARKS	1wmwa	0.128	0.899	1.153	threading_1	PLYRDLLQ-------DYPRLRGLLTVYSALAHGAPLEAGLEAATALELFQNWVLVHDDIEDGS---EERR--GRPALHRLHPMPLALNAGDAMHAEMWGLLAEGLEVLLEFHEVVRRTAYGQHLDLLWTLGGTFDRMVAAYYTAVAPLRLGALLAGKTPPAAYEEGGLRLGTAFQIVDDVLNLEGGGDLYEGKRTLILLRFLEEAPPEERARALALLALP----------------REAKPEAEVGWLLERLLASRALAWAKAEAKRLQAEGLALLEAAFQD--LPGKDHLRGLLA
2	PROSPECT2	3a0oA3	0.097	0.976	1.562	threading_2	GAFADAVAKDPNHCGWAEFYEKSVEPWLERPVMPERQMYIDCQEVIYAIRHLAIAGRVLGRDDLLDASRKAWDTKGATSRAYNDEAGFRVVVALAWGYDWLYDERRTVRSVLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATLPHYWMTGMAYLIEAANL----IRSYIGYDLYQRPFFQNTGRFPLYTKAPTLGDLPGLKLGYNVRQFAGVYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQVEAVS---PADLP
3	PPA-I	3g61A1	0.098	0.963	1.012	threading_3	VSVLTMFRYAGWLDRLYMLVGTLAAIIHGV--ALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRA-------MFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGGDKIGMFFQAMATFFGGFIIGFTRIIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQ--ALKDKKELEGSGKIATEAIENFRTVVSAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRF
4	SPARKS	1wy0a	0.129	0.892	1.031	threading_4	VLYEAARHYVRPFVVLTS----------TEAVGGDPLRAIYPAVAIELIHNYSLVHDDIMDMD---ETRR--GKPTVHRIWGVNMAILAGDLLFSKAFEAVPEKKARVLEVIVKASNELCEGQARDLEFEKKSTEMISGGALFEASAKVGGIIGTDNEEYIKALSSWGRNVGIAFQIWDDVLDLIADEKKLGKPVGSIRKGKKTLIVAHFFENADEKDKQRFLKIFGKD-----------IKSDVMEAIDLLKKYGSIDYAAEIAKDMIKKANE-----ALRI-LPKSELLAKFIV
5	PROSPECT2	1ezfa	0.087	0.892	1.489	threading_5	NSLKTCYKYLNNAVCIFYLVLRALDTLEDDMTISVEKKVPLL-------------------HNFHSFLYQPDWRFMESKEKDRQVLEDFPTI-----SLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGGREFWPFAKPENIDLAVQCLNELITNALDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNATNMPAVKAIIYQYMEEIYSSKTRQIISTIRTQN--------
6	PROSPECT2	1xm9A	0.103	0.986	1.478	threading_6	LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVICKLVDLNVQQAAAGALRNLVFRSTTNKLETRRQNGIRERRTGNAEIQKQLTGL----LWNLSSTDELKEELIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPEEETNPKGSGWLYHSDAIRTYLCAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSILSSACYTVRNLMASQPQLAKQYF
7	PROSPECT2	1ee4a	0.098	0.997	1.469	threading_7	QELPQMTQQLNPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTVKEQAIWALGNVAGDSTDYRDYVLQCNAMEFNSNKPSLIRTATWTLSNLCWSVVSQALPTLAKLIYSMDTETLVDACWAISY-LSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEACWAISNASSGGLQRPDIIRYNRIIEVTLDALENILKMGEADKEARGLNKIIETYF
8	PROSPECT2	1ejlI	0.108	0.997	1.427	threading_8	WSVEDIVKGINNNLESQLQATQAARKLLSREKQPPIDNIFVSFLGSPIQFESAWALTNIASGTSEQTKAVVDGGALASPHAHISEQAVWALGNIASAFRDLVIKHGAIDPLLALCGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLH-HNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLGATELPIVTPALRATDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIVPFLVGVLSKADFKTQKEAAWAITNYQVILDAISNIFQAAEKLGETLIEKYF
9	MUSTER	3zuxA	0.113	0.895	0.870	threading_9	NILSKISSFIGKTFSLWAALFAAAAFFAPDTFKW-----YIPWLLGIIMFGMGLTL------KPS-DFDILFKHP-------KVVIIGVIAQFAIMPATAWCLSKLLLPAEIAVGVILVGCCTASNVMTYLA--GNVALSVAVTLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTE---------TDALPLVSVAAIVLIIGAVVGASKGKISGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGM-SGLAAALAAAHFAAAPPGALFSVW
10	SPARKS	1rqia	0.079	0.818	0.985	threading_10	QQLEACVKQANQALSRFIPVVETMQYGALLGGGVSTNTLDAPAAAVECIHAYSLIHDD--LPAMDDDDLR-RGLPTCHVKFGEANAILAGDALQTLAFSILSVSDRDRISMISELASAMCGGQALDLDAEGKHVPGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSL------------DTSALEALADYIIQRNK---------------------------------------

Predicted Tertiary Structure


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TM-score=0.427 to 1pv6A SCOP code=f.38.1.2	TM-score=0.770 to 2q80A SCOP code=a.128.1.1	TM-score=0.591 to 1cemA SCOP code=a.102.1.2	TM-score=0.431 to 1ka4A SCOP code=d.92.1.5	TM-score=0.426 to 2ifoA SCOP code=h.1.4.1