Template-based Modeling Results for CYNS_ECOLI

Submitted Primary Sequence

>Length 156
MIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQVYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQVYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCCCCEEEEEECCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQVYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF
553221242222200200120125341201200300211200000001122202230031003203023300210220123111232112211001001002100100120013201200000000301022221343221000001031022444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQVYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF
1	MUSTER	2iuoA	0.994	1.000	4.385	threading_1	MIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQVYGTTLKALVHEKFGDGIIGAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF
2	SPARKS	1dw9a	0.980	0.974	4.661	threading_2	-IQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQ-IPLRGCIDDRIPTDP-TYRFYELQ-VYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF
3	PROSPECT2	1dw9a	0.980	0.974	2.849	threading_3	I-QSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLL-QIPLRGCIDDRIPTDP-TYRFYE-LQVYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF
4	PPA-I	2iuoA	0.994	1.000	6.316	threading_4	MIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQVYGTTLKALVHEKFGDGIIGAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF
5	HHPRED-l	1dw9_A	1.000	0.968	10.082	threading_5	-IQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQ-IPLRGCIDDRIPTDPT-YRFYE-LQVYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKP-
6	HHPRED-g	1dw9_A	1.000	0.974	9.117	threading_6	-IQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQ-IPLRGCIDDRIPTDPT-YRFYE-LQVYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF
7	SP3	1dw9a	0.980	0.974	4.366	threading_7	-IQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQ-IPLRGCIDDRIPTDP-TYRFYELQ-VYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF
8	SAM-T99	2iuoA	0.994	1.000	7.736	threading_8	MIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQVYGTTLKALVHEKFGDGIIGAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF
9	MUSTER	3f51A	0.128	0.603	1.055	threading_9	-----PEPLLREALGAALRSFRADKGVTLRELAEASRVSPGYLSELERGRKEVSSELLASVCHALGASVADVLIEAA-----------GSMALQAAQEDLARVLEWSHPQ----------------------------------------------
10	SPARKS	1dw9a2	0.956	0.436	2.290	threading_10	--------------------------------------------------------------------------------------RIPTDP-TYRFYELQ-VYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.976 to 2iuoA TM-score=0.972 to native SCOP code=a.35.1.4	TM-score=0.976 to 2iuoA TM-score=0.972 to native SCOP code=a.35.1.4	TM-score=0.972 to 2iuoA TM-score=0.974 to native SCOP code=a.35.1.4	TM-score=0.959 to 2iuoA TM-score=0.960 to native SCOP code=a.35.1.4	TM-score=0.976 to 2iuoA TM-score=0.972 to native SCOP code=a.35.1.4

Experimental Structure

Download 2iu7A

SCOP code=a.35.1.4