Template-based Modeling Results for CYNR_ECOLI

Submitted Primary Sequence

>Length 299
MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVVGGNESR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVVGGNESR
CCHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCEEECHHHHHCCCCCEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVVGGNESR
34021001010003311012002102111021120033004212120011211102003001101310140031012013102302332201010000100011000200120133012010101211332012101433000000002242320200000213000000430100223301022024120000223000120002004502121200010110100120033301000001001233310100102212121100001124221020031002001210321223444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVVGGNESR
1	MUSTER	1iz1B	0.254	0.973	3.217	threading_1	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGKTCKLADLRAVELTLFPRGGSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAARWPDIAFARIVGTRVKVPISCIFRKEK-QPPILARFVEHVRRSAKD-------
2	SPARKS	1iz1a	0.256	0.967	5.153	threading_2	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGKTCKLADLRAVELTLFPRGGSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAARWPDIAFARIVGTRVKVPISCIFRKEK-QPPILARFVEHVRRSA---------
3	PROSPECT2	1iz1a	0.253	0.967	4.961	threading_3	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGKTCKLADLRAVELTLFPRGGSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAARWPDIAFARIVGTRVKVPISCIFRKEKQ-PPILARFVEHVRRS---------A
4	PPA-I	1iz1B	0.254	0.973	5.803	threading_4	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGKTCKLADLRAVELTLFPRGGRFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAARWPDIAFARIVGTRVKVPISCIFRKEK-QPPILARFVEHVRRSAKD-------
5	HHPRED-l	1ixc_A	0.246	0.940	3.386	threading_5	-EFRQLKYFIAVAEAGN-AAAAKRLHVSQPPITRQ-QALEADLGVVLLE-----IELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTH-TKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGKTCKLADLRAVELTLFPRGPSFADEVIGLFKHAGIEPRIARVVEDATAALALT-AGAASSIVPASVAAIWPDIAFARIVGTRVKVPISCIFRKEK-QPPILARFVEHVRRSAKD-------
6	HHPRED-g	1al3_A	0.201	0.716	2.988	threading_6	-------------------------------------------------------------------------------------TWPDKGSLYVATTHTQARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEAHLYDDLVMLPCYHWNRSIVVTPEHPLATKGSVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVDPDPDLVKLDANGIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVALPEK
7	SP3	1iz1a	0.253	0.967	5.533	threading_7	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGKTCKLADLRAVELTLFPRRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAARWPDIAFARIVGTRVKVPISCIFRKEKQ-PPILARFVEHVRRSA---------
8	SAM-T99	1iz1B	0.255	0.970	3.594	threading_8	MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGKTCKLADLRAVELTLFPRGGRFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAIRWPDIAFARIVGTRVKVPISCIFRKE-KQPPILARFVEHVRRSAK--------
9	MUSTER	3fxrA	0.256	0.967	3.048	threading_9	LKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDTDLEAQPLYVSDVVIVGQRQHPMANATRLA--ELQECRWAFSSAPRGPGAIIRNAFARYGLPPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERKDQLCSIPLQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHAL--------
10	SPARKS	3fxra	0.256	0.967	5.000	threading_10	LKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDTDLEAQPLYVSDVVIVGQRQHPMANAT--RLAELQECRWAFSSAPRGPGAIIRNAFARYGLPPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNDQLCSIPLQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHAL--------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.921 to 1iz1B TM-score=0.772 to native SCOP code=a.4.5.37	TM-score=0.917 to 1iz1B TM-score=0.774 to native SCOP code=a.4.5.37	TM-score=0.820 to 1iz1B TM-score=0.745 to native SCOP code=a.4.5.37	TM-score=0.816 to 1iz1B TM-score=0.742 to native SCOP code=a.4.5.37	TM-score=0.923 to 1iz1B TM-score=0.774 to native SCOP code=a.4.5.37

Experimental Structure

Download 3hfuB

SCOP code=c.94.1.1