Template-based Modeling Results for C561_ECOLI

Submitted Primary Sequence

>Length 176
MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMIHVSCGISILVLMVVRLLLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGLVMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHYFWKDNTLLRMMPRKRS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMIHVSCGISILVLMVVRLLLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGLVMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHYFWKDNTLLRMMPRKRS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMIHVSCGISILVLMVVRLLLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGLVMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHYFWKDNTLLRMMPRKRS
55541122000000000000000000010211124223100110010000000000000000202132132124122011000100000000000000000000111312211010021121132223002002100200000000000000000000000122200122023443
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMIHVSCGISILVLMVVRLLLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGLVMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHYFWKDNTLLRMMPRKRS
1	PROSPECT2	1t33A	0.074	0.841	1.051	threading_1	MNIPTTCAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMTVNLSKFISREQLSPT-------SAYQLVHEQVIDPLHTHLTRLVAAYT------------------GCDANDTRMILHTHALLGEVLAFRLGKETIEKAELIYQTV---TCHIDLILHGLTQ
2	HHPRED-l	1kqf_C	0.154	0.886	4.678	threading_2	MIVRTKFIDRACHWTVVICFFLVALSGISFFFPLFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKD--IPWLLNIQKMMFWSIMSMIFVLLVTGVIIW------------RPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWV-----KGSIKGMIEGKV-
3	HHPRED-g	1kqf_C	0.159	0.892	5.357	threading_3	MIVRTKFIDRACHWTVVICFFLVALSGISFFFPTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKD--IPWLLAGQKMMFWSIMSMIFVLLVTGVIIW---------R--PY-FAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWV-----KGSIKGMIEGKVS
4	HHPRED-g	1kqf_C	0.105	0.540	1.231	threading_4	-----------------------------------------------------------------SKSKMI-VRTKF----IDRACHWTVVICFFLVALSGISFFFPTL-----------QWLTQTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLKGNKYN
5	MUSTER	1kqfC	0.179	0.886	0.722	threading_5	MIVRTKFIDRACHWTVVICFFLVALSGISF-FFPTGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPGNEHKVADVGKAGQKMMFWSIMSMIFVLLVTGVII--------PYFAQYFP------MQVVRYSLLIHAAAGIILIHAILIHMYMAFWV-----KGSIKGMIEGKVS
6	SPARKS	1zk8a	0.054	0.733	0.743	threading_6	LYNHVKG-LQDVRKNLGIYGIKKLHNRLEEAAEDKRDEAIHALGEAYVAFVRKHPGLYEA---TFLRDEEVRKAGDGIVKLCLQVENALHATRGFRSICHGFASIEQQGG--------FGLPLDLDISLHVLLETFIKGLR-----------------------------------
7	PROSPECT2	2fbqA	0.140	0.892	0.978	threading_7	AQSE--TVERILDAAEQLFLIQAVFSRFLGPFCASLEKELDRRQAKPEAQHATLEDLLHLLVSQAMAVKPRSGNDLSIFMRLLGLAYLEEVYGKVFRRYMLLVNEAAPKLP-----------------PIELFWRVHFMLGAAAFSMSGIKALRAMAETDFGVNTSTEQVMESGID
8	PPA-I	1kqfC	0.160	0.926	0.814	threading_8	MIVRTKFIDRACHWTVVICFFLVALSGISFFTQTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKPWLLNIVEVLKGAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFP--------MQVVRYSLLIHAAAGIILIHAILIHMYMAFWV-----KGSIKGMIEGKVS
9	HHPRED-l	2qjy_A	0.128	0.932	0.441	threading_9	PHDHYEPIVALWGVVLAFCLVLQIVTGIVLAMHPHVDRFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREV-TWI------VGMLIYLAMMATAFMGYVLPWGGLGAIPGIGHSILGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGN---NNPTG-VEVRDT-
10	HHPRED-g	2qjy_A	0.113	0.903	0.615	threading_10	LHSRIVALAYIWGVVLAFCLVLQIVTGIVLAMHYTPHFFMLRYLHANGASLFFIAVYFRGLYYGSYKAPRE----------VTWIVGMLIYLAMMATAFMGYVLSFWGAGAIPGIGHSIQTLPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPT-------GVEVR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.722 to 1t33A SCOP code=a.4.1.9	TM-score=0.766 to 1kqfC SCOP code=f.21.1.1	TM-score=0.774 to 1kqfC SCOP code=f.21.1.1	TM-score=0.482 to 1skvA SCOP code=a.30.5.1	TM-score=0.768 to 1kqfC SCOP code=f.21.1.1