Template-based Modeling Results for CVRA_ECOLI

Submitted Primary Sequence

>Length 578
MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIAMIQHHESNISWMFIVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFSLTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKEDNEVLKIGVRVAEEEAES
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIAMIQHHESNISWMFIVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFSLTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKEDNEVLKIGVRVAEEEAES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHEEEEEHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCHHHCCCCCCCEEEEEEECCEEEEECCCCEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCEEEEEEEEECCEEEEEEEECCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIAMIQHHESNISWMFIVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFSLTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKEDNEVLKIGVRVAEEEAES
55221110000000000000000100122020110000000000001200100212212001000000000000101030302102200010000000000000000000000012030000000000000100000010022321333002001000011120000000001001322321111110010011000000000000000100122122220010000000000000001002010000000000002122231220012002000100100000000010112101100000000000000001000000001223202132000000003200000000000111113212100000000000000010000000021030222322422231113123323110010202233311111032030143010000012311011223220231000000023421210030024232222232000201030203011003000032133233332100200121022112211101011000000122322002000202334369
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIAMIQHHESNISWMFIVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFSLTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKEDNEVLKIGVRVAEEEAES
1	MUSTER	3orgA	0.120	0.820	0.958	threading_1	RLAGRFAGYILYVVSGVALCLLSTFWCAVLGLPQMKSILS-GFYDKMRSALE-------LRVLFAKALGLICAIGGGLP---------VGWEGPNVHIACIIAHQFYRLVFKELCTDRALRLQTLAAAC----AVGLASSFG----APLGGVLYSIETIASFAFWKGVLSALSGAIVYELDVSRTQTLLYAILGALMGVLGALFIRCVRSIYELRMRHYPGTNRYFLVGVVALFASALQY--------------------PFPRATINDLFKAVTELILMPIIKFILVALS-IGLPLPAGVFVPSFLIGAGFGRLYGELMRVVFGNAIVPGSYAVVGAAAFTAGVTLSCAVIIFEVQIRHLVPVLISVLLAVIVGNAFNRSLYETLVLMKHLPYMPILRRDRSPEMTAREIMHPIEGEPHLFPDSE-PQHIKGILEKFPNRLVFPVIDAN-------------GYLLGAIS----RKEIVDRLQHVVVPCDVS----PIVVTSYSLVRQLHFLFVLMPS-----------------------------------MIYVTERGKLVGIVERVAYGYSN-
2	SPARKS	3jxoa	0.274	0.145	1.377	threading_2	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYFQGMIPLEQGIEFLSVNVEEDSPVVGKKLKDLPLPRDSIIAAIVRGGVLVVPRGDTEILSGDKLYVIVSAEAKETVEETLL----------------------------------------------------------------------------------------------
3	PROSPECT2	1jdha	0.117	0.796	2.151	threading_3	LNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQAYGNQESKLIILASGGPQALVNIMRTY---TYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLSQRLVQNCLWTLRNLSDAATKQEGMEGLLGT--------LVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQ--VGGIEALVRTVLRAGDREDITEPAICALRHLMAQNAVRLHYGLPVVVKLLHPPSHWP------------LIKATVGLIRNLALCPA------------NHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHIL---ARDVHNRIVIRGLNT--------------------------------------IPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGAELLHSRNEGVATYAAAVLFRM----------------------------------------S
4	PPA-I	3g61A1	0.082	0.593	1.001	threading_4	---------------------VSVLTMFRYAGWLDRLYMLVGTLA-AIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEI----GWF-----DVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGF---------TRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDS-----FSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSL-----------TREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVTQQLMT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	HHPRED-l	2oai_A	0.156	0.133	2.254	threading_5	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDAL-VTREDGSFLIDGTLPIEELREVLGA-------NNYHTLAG-CISYFGRIPHVGEYFDWAGWRIEIVDLDGARID-LLLQRLN-----
6	HHPRED-g	2oai_A	0.176	0.128	2.265	threading_6	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDTREDGSFLIDGTLPIEELREVLGA-------NNYHTLAG-CISYFGRIPHVGEYFDWAGWRIEIVDLDGARID-LLLQRLN-----
7	SP3	3m1ic	0.094	0.998	0.559	threading_7	LQFSTNPQSKFIALSILDKLITRKPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQFIPELIGSSSSSVNVCENNMIVLKLLSEEVMTQAKALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLYETNILELL-STKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIAADLKATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIHNLVADLFKHIEEICSQLRLVIISDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAFVVTVIKDLLDLTVKKRGKDNKAVVASDIMYVVGYPRFLKWNFLRTVILKLFEFMHETHEGVQDMACDIVQKCKYHFVIQQPRESEPFIQRDIQKTTADLQPQQVHTFYKACGIIISEERSVAERNRLLLMQLNMAWDTIVEQSTANPTLLLDSETVKIIIIKTNVACTSMGADFYPQLGHIYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKARNLD
8	SAM-T99	3l4bC	0.207	0.234	1.229	threading_8	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKVIIIGGETTAYYLARSMLSRKYGVVIINLRDAEVSKNDVVVI---------------------------------------------------------LTPRDEVNLFIAQLVMKDFGVEFLSVNVEEDSPVVGKKLKDLPLPRDSIIAAIVRGGVLVVPRGDTEILSGDKLYVIVSAEAKETVEETLL----------------------------------------------------------------------------------------------
9	MUSTER	1b3uA	0.111	0.907	0.950	threading_9	SLYPIAVLIDELVQLRLNSIKKLSTIALALG-VERTRSELLPFLT--------TIYDEDEVLLALAEQLGTFTTLVGGPEYVHCL---LPPLESLATV-TVVRDKAVESLRAISHEHSHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLAS-DSVRLLAVEACVNIAQLLPEALVMPTLRQAAEWRVRYMVADKF---TELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSQHVKSALASVIMLGKDNTIEHLLPLFLAVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDWRVRLAIIEYMPLLAGQLGVEFFDSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEAHATIIP---KVLAMSGDPNYLH-----RMTTLFCINVLSEVCGQDITTKHM-----LPTVLRMAGD---VANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQ----DV---------VKYFAQEALTVLSLA--------
10	SPARKS	1vcta	0.174	0.329	1.376	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YEPKSVKEIFIEMKDTVELMVDLAYASLLFGD--KEIAEEVLELEERIDLLNYQLMMHSVLAAR---NVKEA--------EQVITILQIANAIEDISNAAGDLAKMVL---------------------------EGVELHPVIKETILEGEEIIGKIQVYPESVIVGKTLGELDLATGVWIIAVRRGKRWIFPNENFKIRAGDVLIGRGTRTSIDHLKEIARGAIRVIG---------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.632 to 1kpkA SCOP code=f.20.1.1	TM-score=0.642 to 1kpkA SCOP code=f.20.1.1	TM-score=0.428 to 2bkpA SCOP code=a.7.12.1	TM-score=0.616 to 1wa5B SCOP code=a.118.1.1	TM-score=0.401 to 1h6gA SCOP code=a.24.9.1