Template-based Modeling Results for CVPA_ECOLI

Submitted Primary Sequence

>Length 162
MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRCFFDYLQSSSSFLPRA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRCFFDYLQSSSSFLPRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRCFFDYLQSSSSFLPRA
330100000000000000100110021001000000000000000210020011132310110000000000000001001100020023110200010000000001000000000000110111232320130200110110020013103211222344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRCFFDYLQSSSSFLPRA
1	SPARKS	1jl7a	0.135	0.821	1.012	threading_1	---------------GLSAAQRQVVASTWKDIAGVGKECLSKFISPEMAAVFSGASDPGVAELGAKVLAQIGVAVSEGKMVAEMKAVGVRHKGYGNKHIKAEYFEPLGASLLSAMEHRIGGKMN-----AAAKD-AWAAAYGDISGALISGLQS--------
2	PROSPECT2	1t33A	0.105	1.000	1.116	threading_2	MNKGEQAKSQLIAAALAQFGEYGLTRDYLACAQWIADFLGEKPHAEKAERLFSQPAPDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDE
3	PPA-I	2x2vA	0.179	0.414	1.017	threading_3	--------------------------------------------------------AFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELGTLQTLMFIGVPLAEAVPIIAIVISLLILF---------------------------------------
4	PROSPECT2	2of3A	0.119	0.981	1.020	threading_4	AEQLQTLLQHLAALDSLVRLADTSPRSLLSNSDLLLKWCTVLELCKVIVELIRDTETPMSQEEVSAFVPYLLLKTMRTSVRDIVNVLSDVVG---PLKMTPMLLDALKSARQRSECLLVIEYYITNAGISPLKSLSVEKTINVLVACFKFEGDQMWKAAGRM
5	PPA-I	1t33A	0.074	1.000	1.007	threading_5	ATTRDIAALAIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFD
6	MUSTER	3a0oA	0.118	0.938	0.757	threading_6	EAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQ-----SDEAGEWLDYT-VEFLATLYGGWAGPHYWMTGMAYLIEAANLIRSYIGYDLYQR----PFFQNTGRFPLYTKAPGTRRANFG
7	SPARKS	2w53a	0.140	0.926	0.885	threading_7	TTLEMIGARAGYTRGAVYWHKSEVLAAIVERV--------HLPFMQELERTSTDQRDTPVHDLRAVMIHSFIELSEDERLRKTMEIMLRSTELDRMERALRRARGQLRGADPKIAARMLHATVLGV-LHGAMVEPELMDLKRDGMLALDMTLA---AYVKDG
8	PROSPECT2	1h0oa	0.071	0.963	0.989	threading_8	NPERHFISHVLAFFAASDGIVNENLKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKK------RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFLTEALPVKLIGMNCE
9	PPA-I	3mvpA	0.065	0.852	0.969	threading_9	KRYNDFFLTTIFADINSQDSLDRFKKNPKEWLNVLINQLLAAEDKIFHAQIELAYAIPQAKALLEEHNNNLKNLTYKCLLYYSDQ--------------AANPSFKTLSLVVFDFISALVDELLYHEHTQEEAHQIKKTGIDSLDLIIKSYL----------
10	HHPRED-l	2vv5_A	0.127	0.630	0.528	threading_10	----------------------------------------------------L----SYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKID--ATVADFLSALVRYGIIAFTLIAALGRV-GVQTASVIAVLGAAGLLGSLSNLAAGVLLVMFRPFRA-

Predicted Tertiary Structure


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TM-score=0.835 to 1jf3A SCOP code=a.1.1.2	TM-score=0.843 to 1t33A SCOP code=a.4.1.9	TM-score=0.499 to 1rw6A SCOP code=a.47.4.1	TM-score=0.601 to 1wa5C SCOP code=a.118.1.1	TM-score=0.851 to 1t33A SCOP code=a.4.1.9