Template-based Modeling Results for CSIR_ECOLI

Submitted Primary Sequence

>Length 220
MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMAGN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMAGN
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMAGN
5422122013101210130203233403121003213101010120011023220010112200100201331011001000001100001002201331121012102201312213133311320130021001000200203101200230120011000001221222231122102102200000222112100300320021002100311344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMAGN
1	MUSTER	2hs5A	0.176	0.927	2.662	threading_1	-TSRTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPTAEDITELYICRRVVECAGVNGF--DPATGDLSRVAEALDLADERYAV----EDWTGVGTADIHFHSALASLNNSNRIDELRSVWNEARLVFHV-------DAHRFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQILGAYR--
2	SPARKS	2hs5a	0.176	0.932	4.642	threading_2	-TSRTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPTAEDITELYICRRVVECAGVNGF--DPATGDLSRVAEALDLADERYA----VEDWTGVGTADIHFHSALASLNNSNRIDELRSVWNEARLVFH------VDDAHRFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQILGAYR--
3	PROSPECT2	3dbwA	0.187	0.923	2.860	threading_3	VD-LVRTKVYNLLKEILNHELKLGEKLNVRELSEKLGISFTPVRDALLQLATEGLVKVVPRVGFFVTDVDEKFIRETIETRIEVFCLENYFDKIAGSE----ELLEIKGEIDDVAAS----AAREIFDDSDERLHKLFIRASGNELIISLYEKIWDRIDLVR--------HLNERYVVSNREHKELIERIISGDKEGAIEKLKEHLKNVEAETIKNLERS
4	PPA-I	2hs5A	0.176	0.932	3.196	threading_4	-TSRTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPTAEDITELYICRRVVECAGVNGF--DPATGDLSRVAEALDLADERYAV----EDWTGVGTADIHFHSALASLNNSNRIDELRSVWNEARLVFHVDDAH------RFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQILGAYR--
5	HHPRED-l	2hs5_A	0.171	0.932	3.794	threading_5	-TSRTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPTAEDITELYICRRVVECAGVNGFD--PATGDLSRVAEALDLAD---E-RYAVEDWTGVGTADIHFHSALASLNNSNRIDEL-RSVWNEARLVFHV-----DDAHRFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQILGAYR--
6	HHPRED-g	2hs5_A	0.176	0.932	3.741	threading_6	-TSRTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPTAEDITELYICRRVVECAGVNGFDP--ATGDLSRVAEALDLADERYA----VEDWTGVGTADIHFHSALASLNNSNRIDEL-RSVWNEARLVFHV-D----DAHRFHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQILGAYR--
7	SP3	2hs5a	0.185	0.932	4.444	threading_7	-TSRTTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHELNRGVFVRVPTAEDITELYICRRVVECAGVNGFDPATG--DLSRVAEALDLADERYA----VEDWTGVGTADIHFHSALASLNNSNRIDELRSVWNEARLVFHVDDAHR------FHGPYLTRNHEIYDALAAGNTEAAGQLLKTYLEDAEAQILGAYR--
8	SAM-T99	3fmsA	0.208	0.873	3.941	threading_8	--------YNLLKE-ILNHELKLGEKLNVRELSEKLGISFTPVRDALLQLATEGLVKVVPRVGFFVTDVDEKFIRETIETR--IEVFCLENYFDKI--AGSEELLEIKGEIDDVAAS----AAREIFDDSDERLHKLFIRASGNELIISLYEKIWDRIDLVRHLNERY--------VVSNREHKELIERIISGDKEGAIEKLKEHLKNVEAETIKNL---
9	MUSTER	3fmsA	0.197	0.923	2.613	threading_9	VDLVRTKVYNLLKE-ILNHELKLGEKLNVRELSEKLGISFTPVRDALLQLATEGLVKVVPRVGFFVTDVDEKFIRETIETRIEVFCLENYFDKIAGS----EELLEIKGEIDDVAAS----AAREIFDDSDERLHKLFIRASGNELIISLYEKIWDRIDLVRHLN--------ERYVVSNREHKELIERIISGDKEGAIEKLKEHLKNVEAETIKNLYTY
10	SPARKS	3fmsa	0.192	0.923	4.422	threading_10	VDLVRTKVYNLLK-EILNHELKLGEKLNVRELSEKLGISFTPVRDALLQLATEGLVKVVPRVGFFVTDVDEKFIRETIETRIEVFCLEN-YFDKIAGSEELLEIKGEIDDVAAS-------AAREIFDDSDERLHKLFIRASGNELIISLYEKIWDRIDLVRHL--------NERYVVSNREHKELIERIISGDKEGAIEKLKEHLKNVEAETIKNLYTY

Predicted Tertiary Structure


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TM-score=0.958 to 2hs5A SCOP code=a.4.5.6	TM-score=0.959 to 2hs5A SCOP code=a.4.5.6	TM-score=0.956 to 2hs5A SCOP code=a.4.5.6	TM-score=0.713 to 2hs5A SCOP code=a.4.5.6	TM-score=0.955 to 2hs5A SCOP code=a.4.5.6