Template-based Modeling Results for CSGD_ECOLI

Submitted Primary Sequence

>Length 216
MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR
553323223101000013120102001220441010002023132002302200000000110223102001100343233010000001321100010020302000012232320020010003221201330012002201323332232220132121002103211202200310100330021001100420213211100110122244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR
1	MUSTER	3c3wA	0.214	0.954	3.223	threading_1	M---------VKVFLVDDHEVVRRGLVDLLGPELDVVGEAGSVAEAMARVARPDVAVLDVRLPDGNGIELCRDLLSR-MPDLRCLILTSYTSDEAMLDAILAGASGYVVKDIKGMELARAVKDVGAGRSLLDNRAAAALMAKLRGAAEKQDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRR
2	SPARKS	3c3wa	0.204	0.954	3.893	threading_2	---------MVKVFLVDDHEVVRRGLVDLLGPELDVVGEAGSVAEAMARVARPDVAVLDVRLPDGNGIELCRDLLSR-MPDLRCLILTSYTSDEAMLDAILAGASGYVVKDIKGMELARAVKDVGAGRSLLDNRAAAALMAKLRGAAEKQDPLSGLTDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQAAVFATELKRS
3	PROSPECT2	3klnA	0.319	0.972	3.580	threading_3	DEN------KLNVRMLSDVCMQSRLLKEALKLPLALEITPFSELWLEPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQDEMWLTRKLAQEYILHYRAGNSVVTSYAKLTKREQQIIKLLGSGASNIEIADKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGI
4	PPA-I	1a04A	0.219	0.931	4.299	threading_4	--------EPATILLIDDHPMLRTGVKQLIAPDITVVGEASNGEQGIELALDPDLILLDLNMPGMNGLETLDKLREK-SLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLER------DVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF
5	HHPRED-l	1a04_A	0.230	0.926	2.836	threading_5	--------EPATILLIDDHPMLRTGVKQLISMDITVVGEASNGEQGIELAEDPDLILLDLNMPGMNGLETLDK-LREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL------ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI-
6	HHPRED-g	1a04_A	0.219	0.931	2.684	threading_6	--------EPATILLIDDHPMLRTGVKQLIAPDITVVGEASNGEQGIELAEDPDLILLDLNMPGMNGLETLDKLREK-SLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL------ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF
7	SP3	3klna	0.310	0.972	4.025	threading_7	------DENKLNVRMLSDVCMQSRLLKEALELPLALEITPFSELWLKPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQDEMWLTRKLAQEYILHYRAGNSVVTSYAKLTKREQQIIKLLGSGASNIEIADKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGI
8	SAM-T99	1a04A	0.234	0.931	3.435	threading_8	--------EPATILLIDDHPMLRTGVKQLISADITVVGEASNGEQGIELSLDPDLILLDLNMPGMNGLETL-DKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLE------RDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF
9	MUSTER	1a04A	0.226	0.921	3.215	threading_9	--------EPATILLIDDHPMLRTGVKQLISPDITVVGEASNGEQGIELALDPDLILLDLNMPGMNGLETLDKLREK-SLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLE------RDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE--R
10	SPARKS	3klna	0.310	0.972	3.805	threading_10	------DENKLNVRMLSDVCMQSRLLKEALELPLALEITPFSELWLEPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQDEMWLTRKLAQEYILHYRASVVTSQMYAKLTKREQQIIKLLGSGASNIEIADKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGI

Predicted Tertiary Structure


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TM-score=0.546 to 1ys6B SCOP code=a.4.6.1	TM-score=0.947 to 1a04A SCOP code=a.4.6.2	TM-score=0.548 to 1ys6B SCOP code=a.4.6.1	TM-score=0.573 to 1qo0E SCOP code=c.23.1.3	TM-score=0.948 to 1a04A SCOP code=a.4.6.2