Template-based Modeling Results for CSGB_ECOLI

Submitted Primary Sequence

>Length 151
MKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFNQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQRQSQMAIRVTQR
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFNQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQRQSQMAIRVTQR
CCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCCCEEEEEEECCCEEEEEEEECCCCEEEEEEECCCCEEEEEEECCCCEEEEEEECCCCEEEEEEECCCCEEEEEEECCCCEEEEEEECCCCEEEEEEECCCEEEEEEEC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFNQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQRQSQMAIRVTQR
5533101100000000000110012112232100002013221321010011042000102111342001000113212020111132100101010311101011113110000012031120101111432101001234211121213
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFNQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQRQSQMAIRVTQR
1	MUSTER	3pg0A	0.157	0.841	1.036	threading_1	---------------------DGYYKLVARHSGKALDVENASTSDGANVIQYGGDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQYGGDNQWRLVDLGDG-YYKLVARHSGKALDVENASTSDGANVIQYSYSGGDN--QQ
2	PPA-I	2z2oC1	0.092	0.795	1.114	threading_2	--------------------------PTPDAKVMCLTISSDGEAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRIT--DDGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITESGDITEFKI---
3	HHPRED-l	3nb3_A	0.136	0.682	1.092	threading_3	---------------------APK-----DNTWYTGKLGWSQ-----------HENKLGGAFGG-------YQVNPYVGFEMGGRMPY---AYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTYSNVHDTGVSPVFAGGVEYAITP-
4	PPA-I	3pg0A	0.148	0.848	1.101	threading_4	---------------------DGYYKLVARHSGKALDVENASTSDGANVIQYGGDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQYGGDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQYSYSGGDN--QQ
5	PPA-I	2vseA4	0.105	0.821	1.067	threading_5	---------------------------NYQTVKDGTYQVSSKLNENKVIEQISTNKVHIFSNSDKENVWNLIYNPILKAYKIKSLKYPNYSLAWDSNNTRTIVAATGDYNDYWLIERNEDNTYIIRNYENRKIVLDLSNGSTTDGNGLLGF
6	PPA-I	1ybiA2	0.116	0.801	1.037	threading_6	------------------------------LNNFTCKISPILDLNKVVQQVDVTNLNVNLYTYGRNQKWTIRYNEEKAAYQFFNTILSNGVLTWIFSNGNTVRVSSSNDQNWLINPVSDTDETYTITNLRDTTKALDLYGGQANGTAIQVF
7	PPA-I	3u4yA2	0.157	0.801	1.029	threading_7	-----------------------------PYDAVGIAISPNGNG-LILIDRSSANTVRRFKIDADGVLFDTGQEFGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNPGTIVVSRDGSTVYVLTESTVDVFNFNQL
8	MUSTER	1ybiA1	0.081	0.894	0.964	threading_8	LNDKIVTISC----------KADTNLFFYQVAGNVSLFQQTRNYLRWRLIYDSNKAAYKIKSMDIHNTLVLTWNAPTHNISTQQDSNADYWLLLKDIGNNSFIIASYKNPNLVLYADTVARNLKLSTLNNSNYIKFIIEDYIISD------
9	SPARKS	3fyfa	0.121	0.934	0.982	threading_9	KKERQEKKALEAQQDSVSYVQAINALKNGSFVLEADNVV-FRNGIMRFV----SSNTNYVEVNDG---QGIIQTAFTNFVYVTVQGNVNGISMRQDKDGNYYNYGINGIAVSATVSIVGGTNQASVTINPNFSGNTLTMNG--YLVPYNEG
10	PROSPECT2	2vsaA3	0.099	0.801	0.968	threading_10	IQN------------------------------SEYQIKNKKDRNIVVTLDSDYGGSPVESYKNFGFKWNIKYDSKKNAYKIYNRETPTLLLSWNSNSSNGETIEKNVNGFYKFRNLSDPSKILDLKDGNTLNKTPLVVSSENSSSLIEKT

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.768 to 2ihoA SCOP code=b.42.2.1	TM-score=0.696 to 1l0qA SCOP code=b.1.3.1	TM-score=0.486 to 1p4tA SCOP code=f.4.1.1	TM-score=0.778 to 2ihoA SCOP code=b.42.2.1	TM-score=0.754 to 2ehiB SCOP code=b.42.2.1