Template-based Modeling Results for CPXA_ECOLI

Submitted Primary Sequence

>Length 457
MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEMQIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKRS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEMQIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKRS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEMQIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKRS
5511101111000000000000000001201122124123221320120122011212222231111122012002322331210001123020012332112002211132322321133312211000100021242210000011022222300110011000000000000000000001100200230120023023221432132321231012002001300210230121022011200320100001011001103332222310330221023011002100200312333222222030220012002201210342222020203322010100130010001000200041033202000112331000101111320133103200210120231222422000000000110033150201022133200101010112356
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEMQIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKRS
1	MUSTER	3dgeA	0.281	0.490	1.497	threading_1	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGEKEFLEVIIDQSNHLENLLNELLDFSRLERKSQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPPVEAYIDPTRIRQVLLNLLNNGVKYSKKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDRA-
2	SPARKS	3d36a	0.232	0.462	4.042	threading_2	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPHMVIRLAASISHEIRNPLTAARGFIQLIEEQPLARQYARIAIEELDRAEAIITDYLTFAKPA---PETPEKLNVKLEIERVIDILRPLANMSCVDIQATLAP--FSVIGEREKFRQCLLNVMKNAIEAMPNGLQVYVSIDNGRVLIRIADTGVGMTKEQLERLGEPYF-----TTKGVKGTGLGMMVVYRIIESMNGTIRIESEIHKGTTVSIYLPLAS--
3	PROSPECT2	1jm6a	0.145	0.678	2.534	threading_3	ASLAG--------------------APKYIEHFSKFSPSPLSMKQFLD----------------------------------------------------------------------------------------------------FGACEKTSFTFLRQELPVRLANIMKEINLLPDRVLPSVQLVQSWYVQSLLDIMEFLDKDPED----------------------HRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYDPVSNQQYFLDRFYLSRISIRMLINQHTLIFDPKHIGSID-PNCSVSDVVKDAYDMAKLLCDKYIQEVNATNATQPIHMVYVPSHLYHMLFELFKNAMRATLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYS----TAPTPAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTD
4	PPA-I	3dgeA	0.281	0.490	2.722	threading_4	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGEKEFLEVIIDQSNHLENLLNELLDFSRLERKSQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPPVEAYIDPTRIRQVLLNLLNNGVKYSKKDVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDRA-
5	HHPRED-l	2c2a_A	0.273	0.497	4.707	threading_5	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEN-VTE--------SKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVCPVEAYIDPTRIRQVLLNLLNNGVKYSDAYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD---------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR--
6	HHPRED-g	2c2a_A	0.282	0.497	3.861	threading_6	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEN-VTESKEL--------ERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGEKEFLEVIIDQSNHLENLLNELLDFSRLERKSQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVCPVEAYIDPTRIRQVLLNLLNNGVKYSKKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD---------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR--
7	SP3	3d36a	0.237	0.462	3.879	threading_7	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPHMVIRLAASISHEIRNPLTAARGFIQLIEEQPLARQYARIAIEELDRAEAIITDYLTFAKPAPE---TPEKLNVKLEIERVIDILRPLANMSCVDIQATLAP--FSVIGEREKFRQCLLNVMKNAIEAMPNGLQVYVSIDNGRVLIRIADTGVGMTKEQLERLGEPYFTT-----KGVKGTGLGMMVVYRIIESMNGTIRIESEIHKGTTVSIYLPLAS--
8	SAM-T99	3dgeA	0.276	0.484	6.277	threading_8	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDR--------------------------MKTEFIANISHELRTPLTAIKAYAETIYNELDLKEFLEVIIDQSNHLENLLNELLDFSRLERKSQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNPCPVEAYIDPTRIRQVLLNLLNNGVKYSDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK----
9	MUSTER	3a0rA	0.176	0.683	1.452	threading_9	----------------------------------------------------------------------FSESILESLET--AIITLSKDGRITEWNKKAEQLFENVLGRKDLPDFEEIGSVKEPVFLNFY--KFGERYFNIRFSPFRNAKTQL----------LEGVIITI------------------------------DVTELYKYEEER---------------KRRERLSILGEMTARVAHEIRNPITIIGGFIMRMKKHETLKKYINIITNELSRLETIVKEILEYSKER---VLEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENIKITSEDMYTKVRVSVWNSGPPIPEELKEKIFSPFF------------TTLGLSICRKIIEDEGGKIWTEN-RENGVVFIFEIPKTPEK
10	SPARKS	2c2aa	0.273	0.497	4.038	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEN------VTESKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGEKEFLEVIIDQSNHLENLLNELLDFSRLERKSQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPPVEAYIDPTRIRQVLLNLLNNGVKYSKKDVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD---------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR--

Predicted Tertiary Structure


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TM-score=0.573 to 1ys3B SCOP code=d.122.1.3	TM-score=0.570 to 1ys3B SCOP code=d.122.1.3	TM-score=0.551 to 1ys3B SCOP code=d.122.1.3	TM-score=0.698 to 1gkzA SCOP code=a.29.5.1	TM-score=0.572 to 1ys3B SCOP code=d.122.1.3