Template-based Modeling Results for CORC_ECOLI

Submitted Primary Sequence

>Length 292
MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDSGQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALASIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQVHVKIPDDSPQPKLDE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDSGQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALASIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQVHVKIPDDSPQPKLDE
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCEECCCCCCEEEEEEHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCCCCEEEEEEEECCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDSGQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALASIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQVHVKIPDDSPQPKLDE
5543323223222343100110012114233423310120032025332123302200200020222201101012010000213220320021013121120000232312000000011002103332321202300230010131230220032024331100000011100200000210022001203232234232301212431000202020310131020312333110000000200220124122020210202002133320110102123433435248
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDSGQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALASIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQVHVKIPDDSPQPKLDE
1	MUSTER	3oi8A	0.480	0.521	1.939	threading_1	-----------------------------SNASAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAITRSRNV--LKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKY--FNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDIIE----------------------------------------------------------------------------------------------------------
2	SPARKS	3oi8a	0.467	0.521	4.166	threading_2	-----------------------------SNASAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAITRSRNVLK--ENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYF--NPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDIIE----------------------------------------------------------------------------------------------------------
3	PROSPECT2	3oi8A	0.480	0.521	2.717	threading_3	-----------------------------SNASAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAITRSRNV--LKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKY--FNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDII----------------------------------------------------------------------------------------------------------E
4	PPA-I	3oi8A	0.480	0.521	5.020	threading_4	-----------------------------SNASAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAITRSRNV--LKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKY--FNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDIIE----------------------------------------------------------------------------------------------------------
5	HHPRED-l	3lhh_A	0.339	0.404	2.393	threading_5	-------------------------------------------------------------------TISSL-VPRSDIVFLDLNLPLDANLRTV-QSPHSRFPVCRNNVDD-VGIISAKQLLSESIAG-ERLELVDLVKNCNFVPNSLSG-ELLEHFRTTGSQ-VFVVDEYGDLKGLVTLQD--DALTGEFF---------------------------------------------------------------------------------------------------
6	HHPRED-g	3lhh_A	0.339	0.404	2.060	threading_6	-------------------------------------------------------------------TISSL-VPRSDIVFLDLNLPLDANLRTV-QSPHSRFPVCRNNVDD-VGIISAKQLLSESIA-GERLELVDLVKNCNFVPNSLSG-ELLEHFRTTGSQ-VFVVDEYGDLKGLVTLQD--DALTGEFF---------------------------------------------------------------------------------------------------
7	SP3	3oi8a	0.467	0.521	3.926	threading_7	-----------------------------SNASAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAITRSRNVLKE--NDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYF--NPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDIIE----------------------------------------------------------------------------------------------------------
8	SAM-T99	3lfrB	0.560	0.428	4.164	threading_8	A----------------------------------------------------------------DLQVRDI-VPRSQI-SIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKA-GDSDVKKLLRPATFVPESKRLNVLLREFRANHNH-AIVIDEYGGVAGLVTIEDVLEQIVGDIE---------------------------------------------------------------------------------------------------
9	MUSTER	3ocmA	0.288	0.500	1.734	threading_9	------------------------------------------------AFG-VEERNVSGVLTLAERSIRSIT-PRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE--GRVRRNRLRDPIIVHESIGIL-RLDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDELP---------------------------------------------------------------------------------------------
10	SPARKS	3ocma	0.288	0.500	3.556	threading_10	------------------------------------------------AFG-VEERNVSGVLTLAERSIRSIT-PRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG--RVRRNRLRDPIIVHESIGILRL-DTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDELP---------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.565 to 2rc3C SCOP code=d.37.1.1	TM-score=0.567 to 2rc3C SCOP code=d.37.1.1	TM-score=0.578 to 2rc3C SCOP code=d.37.1.1	TM-score=0.567 to 2rc3C SCOP code=d.37.1.1	TM-score=0.565 to 2rc3C SCOP code=d.37.1.1