Template-based Modeling Results for COF_ECOLI

Submitted Primary Sequence

>Length 272
MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLVSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLVSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE
CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHHHHHHCCCCCEECCHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHHHCCCEEECCCCCHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLVSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE
20100000021000223330033012001302534010000012102201300030212000000100101113111002220223002200200231400000001110002331220111022122412012133023220110000123310230022014212420200000210010012201101002000320202120000001010002001000000011101210121131120023032300020012002233132235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLVSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE
1	MUSTER	1nf2A	0.224	0.967	3.077	threading_1	MYRVFVFDLDGTLLNDNLEISEKDRRNIEKLSR-KCYVVFASGRMLVSTLNVEKKYKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVENLSELSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASD--IVTLTNNDSGVSYVLERISTD--LD----
2	SPARKS	3niwa	0.208	0.938	4.235	threading_2	KYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRNEGFILSYNGGEIINWESKE-YENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENLDPYVQKEAFLNKAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGTR-EEVIAIGDGYNDLSIKFAGG---VAGNAQEPVKKAADY--ITLTNDEDGVAEAIERIF----------
3	PROSPECT2	3niwA	0.208	0.938	3.990	threading_3	KYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRNEGFILSYNGGEIINWESK-EYENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENSLPYVQKEAFLNKAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGT-REEVIAIGDGYNDLSIKFAGG---VAGNAQEPVKKAADY--ITLTNDEDGVAEAIERIF----------
4	PPA-I	1nf2A	0.220	0.971	4.454	threading_4	MYRVFVFDLDGTLLNDNLEISEKDRRNIEKLSR-KCYVVFASGRMLVSTLNVEKKYFKTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASD--IVTLTNNDSGVSYVLERISTDCLD-----
5	HHPRED-l	3pgv_A	0.354	0.904	2.748	threading_5	-YQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSY-ITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRNDKIVTNVYREDEWY-NRHR-----FFKEAVFNYKLYEPGELDPQGISKVFFTCDHEHLLPLEQA-NARWGDRVNVSFSTLTCLEV-AGGVSKGHALEAVAK-LGYTLSDCIAFGDG-NDAE----AGKGCI-ANAHQRLKDLHPELEVIGSNADDAVPRYLRKLYL---------
6	HHPRED-g	3pgv_A	0.354	0.904	2.461	threading_6	-YQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSY-ITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRNDKIVTNVYREDEWY-NRHR-----FFKEAVFNYKLYEPGELDPQGISKVFFTEDHEHLLPLEQA-NARWGDRVNVSFSTLTCLEV-AGGVSKGHALEAVAK-LGYTLSDCIAFGDG-NDAE----AGKGCI-ANAHQRLKDLHPELEVIGSNADDAVPRYLRKLYL---------
7	SP3	3niwa	0.208	0.938	4.436	threading_7	KYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRNEGFILSYNGGEIINWESKEY-ENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENSDPYVQKEAFLNKAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGT-REEVIAIGDGYNDLSIKFAGG---VAGNAQEPVKKAADY--ITLTNDEDGVAEAIERIF----------
8	SAM-T99	1rkqA	0.227	0.956	3.763	threading_8	-IKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMGDYCITYNGALVQKAAGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPFLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANF--VTKSNLEDGVAFAIEKYVL---------
9	MUSTER	1rkqA	0.237	0.963	3.016	threading_9	AIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEDYCITYNGALVQKADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRSYYTVHESFVATIPLVFCEAEKMPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVAN--FVTKSNLEDGVAFAIEKYVLN--------
10	SPARKS	3r4ca	0.220	0.938	4.138	threading_10	MIKVLLLDVDGTLLSFEHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEI-DAVPYD-GVIALNGAECVLRDGSVIRKVAIPAQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPVVDIEEMERKECCQLCFYFDEEAEQKVMPLLS-----GLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADF--VTDTVDNSGLYKALKHFGVI--------

Predicted Tertiary Structure


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TM-score=0.972 to 1nf2A SCOP code=c.108.1.10	TM-score=0.975 to 1nf2A SCOP code=c.108.1.10	TM-score=0.869 to 1nf2A SCOP code=c.108.1.10	TM-score=0.877 to 1nf2A SCOP code=c.108.1.10	TM-score=0.977 to 1nf2A SCOP code=c.108.1.10