Template-based Modeling Results for COBU_ECOLI

Submitted Primary Sequence

>Length 181
MMILVTGGARSGKSRHAEALIGDSSQVLYIATSQILDDEMAARIEHHRQGRPEHWRTVERWQHLDELIHADINPNEVVLLECVTTMVTNLLFDYGGDKDPDEWDYQAMEQAINAEIQSLIAACQRCPAKVVLVTNEVGMGIVPESRLARHFRDIAGRVNQQLAAAANEVWLVVSGIGVKIK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMILVTGGARSGKSRHAEALIGDSSQVLYIATSQILDDEMAARIEHHRQGRPEHWRTVERWQHLDELIHADINPNEVVLLECVTTMVTNLLFDYGGDKDPDEWDYQAMEQAINAEIQSLIAACQRCPAKVVLVTNEVGMGIVPESRLARHFRDIAGRVNQQLAAAANEVWLVVSGIGVKIK
CEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMILVTGGARSGKSRHAEALIGDSSQVLYIATSQILDDEMAARIEHHRQGRPEHWRTVERWQHLDELIHADINPNEVVLLECVTTMVTNLLFDYGGDKDPDEWDYQAMEQAINAEIQSLIAACQRCPAKVVLVTNEVGMGIVPESRLARHFRDIAGRVNQQLAAAANEVWLVVSGIGVKIK
2000001104111020011012312200000103211330011021123132330100212320120021113331000000000000000022113332332112101210221021002003413120000011011210221420120020003002100210310000001012416
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMILVTGGARSGKSRHAEALIGDSSQVLYIATSQILDDEMAARIEHHRQGRPEHWRTVERWQHLDELIHADINPNEVVLLECVTTMVTNLLFDYGGDKDPDEWDYQAMEQAINAEIQSLIAACQRCPAKVVLVTNEVGMGIVPESRLARHFRDIAGRVNQQLAAAANEVWLVVSGIGVKIK
1	MUSTER	1c9kB	0.822	0.994	3.607	threading_1	-MILVTGGARSGKSRHAEALIGDAPQVLYIATSQILDDEMAARIQHHKDGRPAHWRTAECWRHLDTLITADLAPDDAILLECITTMVTNLLFALGGENDPEQWDYAAMERAIDDEIQILIAACQRCPAKVVLVTNEVGMGIVPENRLARHFRDIAGRVNQRLAAAADEVWLVVSGIGVKIK
2	SPARKS	1cbua	0.822	0.994	5.301	threading_2	-MILVTGGARSGKSRHAEALIGDAPQVLYIATSQILDDEMAARIQHHKDGRPAHWRTAECWRHLDTLITADLAPDDAILLECITTMVTNLLFALGGENDPEQWDYAAMERAIDDEIQILIAACQRCPAKVVLVTNEVGMGIVPENRLARHFRDIAGRVNQRLAAAADEVWLVVSGIGVKIK
3	PROSPECT2	1cbua	0.822	0.994	3.466	threading_3	M-ILVTGGARSGKSRHAEALIGDAPQVLYIATSQILDDEMAARIQHHKDGRPAHWRTAECWRHLDTLITADLAPDDAILLECITTMVTNLLFALGGENDPEQWDYAAMERAIDDEIQILIAACQRCPAKVVLVTNEVGMGIVPENRLARHFRDIAGRVNQRLAAAADEVWLVVSGIGVKIK
4	PPA-I	1c9kB	0.822	0.994	4.325	threading_4	-MILVTGGARSGKSRHAEALIGDAPQVLYIATSQILDDEMAARIQHHKDGRPAHWRTAECWRHLDTLITADLAPDDAILLECITTMVTNLLFALGGENDPEQWDYAAMERAIDDEIQILIAACQRCPAKVVLVTNEVGMGIVPENRLARHFRDIAGRVNQRLAAAADEVWLVVSGIGVKIK
5	HHPRED-l	1c9k_A	0.822	0.934	7.776	threading_5	-MILVTGGARSGKSRHAEALIGDAPQVLYIATSQI------ARIQHHKDGRPAHWRTAECWRHLDTLITADLAPDDAILLECITTMVTNLLFAL----DPEQWDYAAMERAIDDEIQILIAACQRCPAKVVLVTNEVGMGIVPENRLARHFRDIAGRVNQRLAAAADEVWLVVSGIGVKI-
6	HHPRED-g	1c9k_A	0.824	0.939	6.993	threading_6	-MILVTGGARSGKSRHAEALIGDAPQVLYIATSQI------ARIQHHKDGRPAHWRTAECWRHLDTLITADLAPDDAILLECITTMVTNLLFAL----DPEQWDYAAMERAIDDEIQILIAACQRCPAKVVLVTNEVGMGIVPENRLARHFRDIAGRVNQRLAAAADEVWLVVSGIGVKIK
7	SP3	1cbua	0.822	0.994	5.380	threading_7	-MILVTGGARSGKSRHAEALIGDAPQVLYIATSQILDDEMAARIQHHKDGRPAHWRTAECWRHLDTLITADLAPDDAILLECITTMVTNLLFALGGENDPEQWDYAAMERAIDDEIQILIAACQRCPAKVVLVTNEVGMGIVPENRLARHFRDIAGRVNQRLAAAADEVWLVVSGIGVKIK
8	SAM-T99	1c9kB	0.822	0.994	7.410	threading_8	-MILVTGGARSGKSRHAEALIGDAPQVLYIATSQILDDEMAARIQHHKDGRPAHWRTAECWRHLDTLITADLAPDDAILLECITTMVTNLLFALGGENDPEQWDYAAMERAIDDEIQILIAACQRCPAKVVLVTNEVGMGIVPENRLARHFRDIAGRVNQRLAAAADEVWLVVSGIGVKIK
9	MUSTER	3t61A	0.149	0.851	0.722	threading_9	PGSIVVGVSGSGKSSVGEAIAEACG-YPFIEGDALHPPENIRK------SEGIPL-TDDDRWPWLAAIGERLASREPVVVSCLKRSYRDKLRESAPGGLA-HGSESVLAERHSSLLQTQLETLEDPRVRTVAVDVA-----QPLAEIVREALAGLARLAENLYFQSHH-------------
10	SPARKS	1tf7a	0.126	0.790	0.883	threading_10	RSTLVSGTSGTGKTLFSIQFLYNDEPGVFVTFEETP-QDIIKNARSF-------------GWDLAKLVD----EGKLFILD---------------ASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSV--TSVFQQYDASSVVRRELFRLVARLKQIGATTVMTTE---RIEE

Predicted Tertiary Structure


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TM-score=0.996 to 1c9kB SCOP code=c.37.1.11	TM-score=0.996 to 1c9kB SCOP code=c.37.1.11	TM-score=0.923 to 1c9kB SCOP code=c.37.1.11	TM-score=0.921 to 1c9kB SCOP code=c.37.1.11	TM-score=0.996 to 1c9kB SCOP code=c.37.1.11