Template-based Modeling Results for COABC_ECOLI

Submitted Primary Sequence

>Length 406
MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAKAFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGMANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEVLASRGLLIWGPDSGSQACGDIGPGRMLDPLTIVDMAVAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIVTRYDEKNRR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAKAFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGMANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEVLASRGLLIWGPDSGSQACGDIGPGRMLDPLTIVDMAVAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIVTRYDEKNRR
CCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCHHHHHHHCCCCEEEECCCCCCCCCCCHHCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHCHHHHHHHHHHHHCCCEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCEEEEECCCCCEEECCHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAKAFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGMANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEVLASRGLLIWGPDSGSQACGDIGPGRMLDPLTIVDMAVAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIVTRYDEKNRR
5533212000000000000100200220343102010000310320012100210122200011133223121000210320100000001010001000010100000000102010000000012102000012002102321010011321100012212141121210020001101212322200000001114221120100022010200100010013210100000021223123202101020022012001310431100000000111101222123243322323311020021130010013233332000000011230122013112533000000000223231132220000001332222032321310032002101221333355
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAKAFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGMANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEVLASRGLLIWGPDSGSQACGDIGPGRMLDPLTIVDMAVAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIVTRYDEKNRR
1	MUSTER	1u80B	0.982	0.537	1.693	threading_1	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPVNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIELT--------IKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIVTRYDEKNRR
2	MUSTER	3qjgA	0.210	0.411	1.268	threading_2	----GENVLICLCGSVNSINISHYIIELKSKFDEVNVIASTNGRKFINGEILKQFCD-----NYYDEFEDPFLNHVDIANKHDKIIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDYGVSIYPANSYELASKTFKKNVVAEPYKVLEFI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	SPARKS	1u7ua	0.990	0.488	3.944	threading_3	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAA----------------LTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNLDLICANS----------DNNALHLFWQDGDKVLPLERKELLGQLLLDEIVTRYDEKNR-
4	PROSPECT2	3qjgA	0.210	0.411	1.974	threading_4	----GENVLICLCGSVNSINISHYIIELKSKFDEVNVIASTNGRKFINGEILKQFCDN-----YYDEFEDPFLNHVDIANKHDKIIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDYGVSIYPANSYELASKTFKKNVVPEPYKVLEFI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	PROSPECT2	1u7uA	0.985	0.488	2.258	threading_5	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRA----------------ALTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNLDLICANS----------DNNALHLFWQDGDKVLPLERKELLGQLLLDEIVTRYDEKN-R
6	PPA-I	3qjgA	0.210	0.411	2.373	threading_6	----GENVLICLCGSVNSINISHYIIELKSKFDEVNVIASTNGRKFINGEILKQFCD-----NYYDEFEDPFLNHVDIANKHDKIIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDYGVSIYPANSYELASKTFKKNVVAEPYKVLEFI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	PPA-I	1u80B	0.982	0.537	2.960	threading_7	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPVNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIELT--------IKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIVTRYDEKNRR
8	HHPRED-g	1mvl_A	0.272	0.416	3.711	threading_8	----KPRVLLAASGSVAAIKFGNLCHCFTE-WAEVRAVVTKSSLHFLDKLSLPQEVTLYTDEDEWSSWNKIPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIK---------NGAMAEPSLIYSTVRLFWES------Q-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	HHPRED-l	1u7z_A	0.995	0.532	4.760	threading_9	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKI-------DELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIVTRYDEKNR-
10	MUSTER	1e20A	0.282	0.446	1.203	threading_10	---RKPRVLLAASGSVAAIKFGNLCHCFTE-WAEVRAVVTKSSLHFLDKLSLPQEVTLYTDEDEWSSWNKDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNGAMAEPSLIYSTVRLFWESQAH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.762 to 1u80B TM-score=0.973 to native SCOP code=c.72.3.1	TM-score=0.647 to 1g63F TM-score=0.481 to native SCOP code=c.34.1.1	TM-score=0.761 to 1u80B TM-score=0.972 to native SCOP code=c.72.3.1	TM-score=0.647 to 1g63F TM-score=0.481 to native SCOP code=c.34.1.1	TM-score=0.701 to 1u80B TM-score=0.894 to native SCOP code=c.72.3.1

Experimental Structure

Download 1u7zC

SCOP code=c.72.3.1