Template-based Modeling Results for CLPX_ECOLI

Submitted Primary Sequence

>Length 424
MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYGKPEAQQASGE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYGKPEAQQASGE
CCCCCCCCCCCEEEECCCCCCHHHHHHEECCCCEEECHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCHHHHHHHCCHHHHHHCCCCHHHHCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHCCCCCCEEECCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYGKPEAQQASGE
5544443232220000102322310320011110000110020014003432432223334331211330331012101023201400121002102212213223223123100000012110111001000200300000020220112112232132002201220221033122021202322223432332222321212002210132031121212232224223321020102300110010111022001221222222221122323233222220123021300241110021002010000023012300120032122100310110042220102013300100022012331102001100110011011202224311200012211233332100224332442335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYGKPEAQQASGE
1	MUSTER	3hwsA	0.994	0.755	2.756	threading_1	--------------------------------------------------------------ALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRKSDNP---RDVSGEGVQQALLKLIEGT----------------FLQVDTSKILFICGGAFAGLDKVISHRVETG------------SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIY-----------
2	SPARKS	1um8a	0.564	0.736	5.797	threading_2	-----------------------------------------------------------LLSYIPAPKELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLT--------VENILTRLLQASDWNVQKAQKGIVFIDEIDKIG--------------EGVQQALLKIVEGSLVN---------------QIDTSDILFICAGAFDGLAEIIKKRTTQN-VLGFTQEKMSKKEQEA---ILHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTGARGLRAIIEDFCLDIMFDLPKLKG-SEVRITKDCVLKQAEPLIIA-----------
3	PROSPECT2	3hteA	0.965	0.748	4.400	threading_3	-------------------------------------------------------------SALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLT-AGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKIS----------RVSGEGVQQALLKLIEG---------------TEFLQVDTSKILFICGGAFAGLDKVISHRVETG-SGDKASE----------GELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYG---------K
4	PPA-I	3hwsA	0.988	0.755	5.146	threading_4	--------------------------------------------------------------ALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRKSDNP---RDVSGEGVQQALLKLIEGT----------------FLQVDTSKILFICGGAFAGLDKVISHRVETGSDK------------ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIY-----------
5	HHPRED-l	1um8_A	0.567	0.736	5.563	threading_5	-----------------------------------------------------------LLSYIPAPKELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLT--------VENILTRLLQASDWNVQKAQKGIVFIDEIDKI--------------GEGVQQALLKIVEGSLVN---------------QIDTSDILFICAGAFDGLAEIIKKRTT-QNVLGFTQEKMSKK---EQEAILHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTGARGLRAIIEDFCLDIMFDLPKLKG-SEVRITKDCVLKQAEPLIIA-----------
6	HHPRED-g	1g41_A	0.303	0.693	6.253	threading_6	-------------------------------------------------------------SE-MTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEP-LRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFT----VGKEVDSIIRDLTDSAMKLVRQQEIAKNR--------------------------------------------------------KQKAIDAVEQNGIVFIDEIDKICK-KGEY--SGADVSREGVQRDLLPFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRENIGARRLHTVMERLMDKISFSASDMN-GQTVNIDAAYVADALGEVV--ENEDLSRFIL-
7	SP3	1um8a	0.564	0.736	5.226	threading_7	-----------------------------------------------------------LLSYIPAPKELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLT--------VENILTRLLQASDWNVQKAQKGIVFIDEIDKIG--------------EGVQQALLKIVEGSLVN---------------QIDTSDILFICAGAFDGLAEIIKKRTTQ-NVLGFTQEKMSKKEQEA---ILHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTGARGLRAIIEDFCLDIMFDLPKLKGS-EVRITKDCVLKQAEPLIIA-----------
8	SAM-T99	3hwsA	0.994	0.752	7.862	threading_8	---------------------------------------------------------------LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRKSDNP---RDVSGEGVQQALLKLIEGT----------------FLQVDTSKILFICGGAFAGLDKVISHRVETGS------------DKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIY-----------
9	MUSTER	1um8A	0.567	0.736	2.390	threading_9	-----------------------------------------------------------LLSYIPAPKELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLT--------VENILTRLLQASDWNVQKAQKGIVFIDEIDKI--------------GEGVQQALLKIVEGSLVN---------------QIDTSDILFICAGAFDGLAEIIKKRTTQNV-LGFTQEKMSKKEQ---EAILHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTGARGLRAIIEDFCLDIMFDLPKLKGS-EVRITKDCVLKQAEPLIIA-----------
10	SPARKS	1g41a	0.381	0.705	4.774	threading_10	-------------------------------------------------------------SEM-TPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEP-LRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFT----VGKEVDSIIRDLTDSAMKLVRQQEIAKNRLDEIDKICKKGEYSGA--DVSREGVQRDLLPLVEGSTVST------KH-----GMVKTDHILFIASGAFQ------------------------------------VARPSD-----LIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNIGARRLHTVMERLMDKISFSASDMNG-QTVNIDAAYVADALGEVVENEDLSRFIL---

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.723 to 1um8A TM-score=0.987 to native SCOP code=c.37.1.20	TM-score=0.723 to 1um8A TM-score=0.987 to native SCOP code=c.37.1.20	TM-score=0.836 to 1um8A TM-score=0.830 to native SCOP code=c.37.1.20	TM-score=0.789 to 1um8A TM-score=0.911 to native SCOP code=c.37.1.20	TM-score=0.736 to 1um8A TM-score=0.996 to native SCOP code=c.37.1.20

Experimental Structure

Download 3hwsA

SCOP code=c.37.1.20