Template-based Modeling Results for CITG_ECOLI

Submitted Primary Sequence

>Length 292
MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTNNSQLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMAINGDTNVASRGGEGGLRWLQREAQTLLQKGGIRTPADLDYLRQFDRECIERNLSPGGSADLLILTWFLAQI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTNNSQLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMAINGDTNVASRGGEGGLRWLQREAQTLLQKGGIRTPADLDYLRQFDRECIERNLSPGGSADLLILTWFLAQI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTNNSQLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMAINGDTNVASRGGEGGLRWLQREAQTLLQKGGIRTPADLDYLRQFDRECIERNLSPGGSADLLILTWFLAQI
5513122242242122002100200020001002111211111211010140010210010010011001200210021132213201200230011010001211101001100000000000000202323331212100100120030002221323323222012002312021011103210220022001101201332231210000000000022201100230032002101210220143122313201200220032014210011000000000000132
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTNNSQLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMAINGDTNVASRGGEGGLRWLQREAQTLLQKGGIRTPADLDYLRQFDRECIERNLSPGGSADLLILTWFLAQI
1	MUSTER	3h9pA	0.168	0.712	1.202	threading_1	-----------------------------------------------------KFEHFLASAAGAFPAFLEVAEKR----------------IIGEGVLRAVKESRWHENVHFGAFLLLVPLISSWVDIAEAARNRLRRTDFRDSLSVLEAFRLSNLKDRKTEEEIAQKKINLYEWNLIARELVDGFKISIEGAKFLLSFG-----NSGKAVVELYYHLLSKFPDPLVIAK-GREYAEKITEWAEKART---------EEERKELDEKLLKDGANPGTIADLTASSIFLALA
2	SPARKS	3h9pa	0.167	0.699	2.309	threading_2	-----------------------------------------------------KFEHFLASAAGAFPAFLEVAEK----------------RIIGEGVLRAVKESRWHENVHFGAFLLLVPLISS----WDAGGVDIAEAARNRLRRTDFRDSLSVLEAFRLSNLKDRKTEEEIKINLIARELVDGF----KISIEGAKFLLSFG-NSGKAVVELYYHLLSKFPDPLVIAK-GREYAEKITEWAEKART---------EEERKELDEKLLKDGANPGTIADLTASSIFLALA
3	PROSPECT2	3h9pA	0.168	0.712	1.966	threading_3	-----------------------------------------------------KFEHFLASAAGAFPAFLEVAEK----------------RIIGEGVLRAVKESRWHENVHFGAFLLLVPLISSWDAGGVDIAEAARNRLRRTDFRDSLSVLEAFRLSNLKDRKTEEEIAQKPEENLIARELVDGFKISIEGAKFLLSF-----GNSGKAVVELYYHLLSKFPDPLV-IAKGREYAEKITEWAEKART---------EEERKELDEKLLKDGANPGTIADLTASSIFLALA
4	PPA-I	3h9pA	0.168	0.712	1.342	threading_4	-----------------------------------------------------KFEHFLASAAGAFPAFLEVAEKR----------------IIGEGVLRAVKESRWHENVHFGAFLLLVPLISSWVDIAEAARNRLRRTDFRDSLSVLEAFRLSNLKDRKTEEEIAQKKINLYEWNLIARELVDGFKISIEGAKFLLSFG-----NSGKAVVELYYHLLSKFPDPLVIAK-GREYAEKITEWAEKART---------EEERKELDEKLLKDGANPGTIADLTASSIFLALA
5	HHPRED-l	3h9p_A	0.184	0.671	9.768	threading_5	-----------------------------------------------------KFEHFLASAAGAFPAFLEVAE-K------------RIIGEGVLRAVKES-RWH--ENVHFGAFLLLVPLISSWGG-LRRTDFRDSLSV-LEAFRLSN------LKIAQKKINLYEW---APEENLIARELVDGFKISIE-GAKFLLSF---G-NSGKAVVELYYHLLSKFPDPLVIAK-GREYAEKITEWAEKARTEE---------ERKELDEKLLKDGANPGTIADLTASSIFLAL-
6	HHPRED-g	3h9p_A	0.198	0.658	6.963	threading_6	-----------------------------------------------------KFEHFLASAAGAFPAFLEVAE-K---RI---------IGEGVLRAVKES-RWH--ENVHFGAFLLLVPLISSWGG----------VDIAEAARNRLRRTDFRDLEN-----LKKINLYEW-EENLIARELVDGFKISIE-GAKFLLSF---G-NSGKAVVELYYHLLSKFPDPLVIAK-GREYAEKITEWAEKARTEE---------ERKELDEKLLKDGANPGTIADLTASSIFLALA
7	SP3	3h9pa	0.160	0.726	0.631	threading_7	-----------------------------------------------------KFEHFLASAAGAFPAFLEVAEK----------------RIIGEGVLRAVKESRWHENVHFGAFLLLVPLISSWDDIAEAARNRLRRTDFRDSLSVLEAFRLSNLKDRKTEEEIAQKKINLYEWKAPENLIARELVDGFKISIEGAKFLLS-FGNSGKAVVELYYHLLSKFPDPLVIAK-GREYAEKITEWAEKART---------EEERKELDEKLLKDGANPGTIADLTASSIFLALA
8	SAM-T99	3h9pA	0.159	0.712	3.837	threading_8	-----------------------------------------------------KFEHFLASAAGAFPAFLEVAE-------------KRIIGEGVLRAVKESRWHE---NVHFGAFLLLVPLISSWDAARNRLRRTDFRDSLSVLEAFRLSNLKDRKEEEIAQKKINLYEWKAPEENLIARELVDGFKISIEGA-----KFLLSFGNSGKAVVELYYHLLSKFPDPLVIAKG-REYAEKITEWAEKART---------EEERKELDEKLLKDGANPGTIADLTASSIFLALA
9	MUSTER	3hc1A	0.079	0.908	0.684	threading_9	LRIAGKLNDPDVAIDEVADLLLQQVLTARVVHLANSPLYSA-----ARPISSIRDAVIYLGLDLLREAIFTCAIVDLFKTGKGPLNRSTLWAHSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDEEKITFGQAEERLFGTSCEVGFALAKRWS-----------LNEFICDTILYHHDIEAVPYKQAAIVAVAFADEYCTLRRLGFEGHKSVRTLLENHPSWGVIRRSLGGSDFDEKLIVAELDSSIVE-------RAAVDELFLL----
10	SPARKS	1rdr_	0.130	0.842	0.803	threading_10	MSLDINTEQMCLNDSVAMRMAFGNLYAAFHK------NPGVITGSAVGCDPDLFWSKI---PVLMEEKLFAFDYTGYDASLSPFEALKMVLEKIGFGDRVDYIDYLNSGTSIFNSMINNLIIRTLLLKTYKGPHEVDASLLAQSGKDYGLTMTPADKSATFETVTWENVTFLKRFFR-----ADEKYPFLIHPVMKEIHESIRKDPRNTQDHVRSLCLLAWHN---------GEEEYNKFLAKIRSVPIGRALLLPEYSTLYRRWLDSF-----------------------

Predicted Tertiary Structure


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TM-score=0.405 to 2np3B SCOP code=a.4.1.9	TM-score=0.402 to 2np3B SCOP code=a.4.1.9	TM-score=0.417 to 2np3B SCOP code=a.4.1.9	TM-score=0.399 to 2np3B SCOP code=a.4.1.9	TM-score=0.405 to 2np3B SCOP code=a.4.1.9