Template-based Modeling Results for CITE_ECOLI

Submitted Primary Sequence

>Length 302
MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLEDSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRLPKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGIALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEAAHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNGKMVDGPVIDRARLVLSRAELSGIREE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLEDSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRLPKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGIALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEAAHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNGKMVDGPVIDRARLVLSRAELSGIREE
CCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHCCHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCEECCHHHHHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLEDSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRLPKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGIALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEAAHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNGKMVDGPVIDRARLVLSRAELSGIREE
55322233342212100000101121001201203010000003110125223101300020032123431100000122203200100100021112001013032131011013002201420223322010000021010022123002013201000000100012021332330230000000000003101110001011203222001210010232002010001031020014111123310210230020022024322000002110020000220120012022122344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLEDSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRLPKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGIALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEAAHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNGKMVDGPVIDRARLVLSRAELSGIREE
1	MUSTER	3r4iA	0.167	0.974	2.218	threading_1	LTPAEVLFDPAVLPACDHY-AGSEKSLALQQQLGPVFDITLDCEDGAQVGREAQHAELVASLLGSEHDRFGRVGVRIHDFDHAHWRDDVRLILRAAPAYITLPKIRHVHDAAEVAFIEATRREL-GIA-QPVPVQLLVETHGALTRVFDLAA-LPGVEALSFGLDFVSAHDGAIPDTAHPLVRRAKLEISAACHAYGKVPSHNVSTEVRDSVVANDAARARNEFGY-TRWSIHPAQIEAIVAAFAPRDEEITTATEILLAAQSAQ---WGPTRYHDTLHDRASYRYYWSVLRRAQATGRAVP
2	SPARKS	3r4ia	0.186	0.944	5.355	threading_2	----------ALTPAEVLFDPAVLKSLALQQQLGPVFDITLDCEDGAQVGREAQHAELVASLLGSEHDRFGRVGVRIHDFDHAHWRDDVRLILRAAPAYITLPKIRHVHDAAEV-AFIEATRRELGIA-QPVPVQLLVETHGALTRVFDLA-ALPGVEALSFGLDFVSAHDGAIPDTDHPLVRRAKLEISAACHAYGKVPSHNVSTEVRDSVVANDAARARNEFGY-TRWSIHPAQIEAIVAAFAPRDEEITTATEILLAAQSA---QWGPTRYHDTLHDRASYRYYWSVLRRAQATGRAVP
3	PROSPECT2	3r4iA	0.176	0.940	3.948	threading_3	----------ALTPAEVLFDPAVLPSLALQQQLGPVFDITLDCEDGAQVGREAQHAELVASLLGSEHDRFGRVGVRIHDFDHAHWRDDVRLILRAAPAYITLPK-RHVHDAAEVAFIEATRRE--LGIAQPVPVQLLVETHGALTRVFDLA-ALPGVEALSFGLDFVSAHDGAIPDTAHPLVRRAKLEISAACHAYGKVPSHNVSTEVRDSVVANDAARARNEFGY-TRWSIHPAQIEAIVAAFAPRDEEITTATEILLAAQS---AQWGPTRYHDTLHDRASYRYYWSVLRRAQATGRAVP
4	PPA-I	3r4iA	0.159	0.977	2.631	threading_4	LTPAEVLFDPAVLPACDHYAGSEKKSLALQQQLGPVFDITLDCEDGAQVGREAQHAELVASLLGSEHDRFGRVGVRIHDFDHAHWRDDVRLILRAAPAYITLPKIRHVHDAAEVAFIEATRRELG--IAQPVPVQLLVETHGALTRVFDLAA-LPGVEALSFGLDFVSAHDGAIPDTAHPLVRRAKLEISAACHAYGKVPSHNVSTEVRDSVVANDAARARNEFGY-TRWSIHPAQIEAIVAAFAPRDEEITTATEILLAAQSAQ---WGPTRYHDTLHDRASYRYYWSVLRRAQATGRAVP
5	HHPRED-l	1sgj_A	0.304	0.752	5.133	threading_5	---------PPALLRSVLFAPGNRADLIAKLPRSAPDAVVIDLEDAVPGTAKAAARPVAHDAARDLIAPHLAVFVRVNALHSPYFEDDLSVL-TPELSGVVVPKLEMGAEARQVAQMLQER-------SLPLPILAGLETGAGVWNAREIME-VPEVAWAYFGAEDYTTDLGGKRTPGGLEVLYARSQVALAARLTGVAALDIVVTALNDPETFRADAEQGRALGYSGKLCIHPAQVALAHEYFG---------------------------------------------------------
6	HHPRED-g	1sgj_A	0.304	0.752	4.432	threading_6	---------PPALLRSVLFAPGNRADLIAKLPRSAPDAVVIDLEDAVPGTAKAAARPVAHDAARDLIAAHLAVFVRVNALHSPYFEDDLSVL-TPELSGVVVPKLEMGAEARQVAQMLQERS-------LPLPILAGLETGAGVWNAREIM-EVPEVAWAYFGAEDYTTDLGGKRTPGGLEVLYARSQVALAARLTGVAALDIVVTALNDPETFRADAEQGRALGYSGKLCIHPAQVALAHEYFG---------------------------------------------------------
7	SP3	3r4ia	0.173	0.974	5.693	threading_7	LTPAEVLFDPAV-LPACDHYAGSEKSLALQQQLGPVFDITLDCEDGAQVGREAQHAELVASLLGSEHDRFGRVGVRIHDFDHAHWRDDVRLILRAAPAYITLPKIRHVHDAAEV-AFIEATRRELGIA-QPVPVQLLVETHGALTRVFDLA-ALPGVEALSFGLDFVSAHDGAIPDTDHPLVRRAKLEISAACHAYGKVPSHNVSTEVRDSVVANDAARARNEFGY-TRWSIHPAQIEAIVAAFAPRDEEITTATEILLAAQSA---QWGPTRYHDTLHDRASYRYYWSVLRRAQATGRAVP
8	SAM-T99	1sgjA	0.308	0.752	5.270	threading_8	---------PPALLRSVLFAPGNRADLIAKLPRSAPDAVVIDLEDAVPGEAKAAARPVAHDAARDLAAPHLAVFVRVNALHSPYFEDDL-SVLTPELSGVVVPKLEMGAEARQVAQMLQERSL-------PLPILAGLETGAGVWNAREIMEV-PEVAWAYFGAEDYTTDLGGKRTPGGLEVLYARSQVALAARLTGVAALDIVVTALNDPETFRADAEQGRALGYSGKLCIHPAQVALAHEYFG---------------------------------------------------------
9	MUSTER	3oyxA	0.171	0.987	2.032	threading_9	---RHDREFVRTFFTSPTAVEGDSAKMLRRAAGLAPDVWVPDNEDATAPSMRDEGAENIVEVISEQGAEFPGEITRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDELERLFLLVDGEVDYTKDMRAMPTGELPAWPELRHNTSRGASAAGCVAVDGPYDDIRDVEGYRERMTDNQAKGMLGIWSLTPGQVVEANTSPLPPKTGLLDAEELLGLTSYVP-SMDDIVDSMEEFWDEATYQAAMTPISLFQDVYENRP
10	SPARKS	3oyxa	0.168	0.987	5.010	threading_10	---RHDREFVRTFFTSPTAVEGDSAKMLRRAAGLRPDVWVPDNEDATAPSMRDEGAENIVEVISEQVWHRDSPETRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDEMERLFLLVDGEVDYTKDMRAMPTGELPAWPELRHNTSRGASAAGCVAVDGPYDDIRDVEGYRERMTDNQAKGMLGIWSLTPGQVVEANTSPLPPKTWLLDAEELLGLTSYVP-SMDDIVDSMEEFWDEATYQAAMTPISLFQDVYENRP

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.774 to 1sgjA SCOP code=c.1.12.5	TM-score=0.727 to 1sgjA SCOP code=c.1.12.5	TM-score=0.738 to 1sgjA SCOP code=c.1.12.5	TM-score=0.732 to 1sgjA SCOP code=c.1.12.5	TM-score=0.772 to 1sgjA SCOP code=c.1.12.5