Template-based Modeling Results for CITC_ECOLI

Submitted Primary Sequence

>Length 352
MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTRDEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYEALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNGHRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMRYWLETPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQNLLEHSRQDAAARQKTPA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTRDEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYEALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNGHRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMRYWLETPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQNLLEHSRQDAAARQKTPA
CCCHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEEHHCCEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEECCCCEEEHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTRDEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYEALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNGHRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMRYWLETPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQNLLEHSRQDAAARQKTPA
5313200221233333201200200332322132202000001222100000001110010000032024310011002100210242402000000213112003301012012121110013212220320021043233323210000010221110011001100320220000003342321213100200120024032010020120000100000110332210120101000200121002101011110231210300110021022003323222330100202222243210001201300332213100400121003102300431333222334335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTRDEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYEALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNGHRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMRYWLETPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQNLLEHSRQDAAARQKTPA
1	PROSPECT2	2ozgA	0.114	0.869	1.416	threading_1	RF------KYTKASQENIQQLGNILEQCFVSFGDGLENFRVIYREQKVAGGLAILPGQIAAVGIAPEYRGDGAAIALIQHTLQEISEQDIP--ISVLYPATQRLYRKAGY--------------EQAGSSCVWEIPTDSIQIQHASLPLEPVVLKNNPIFH-ELYQQQAQLT----------HGYLDRHPAIWQGLNRTLDTETLYSYLIGDKFTQERTRDGSILRLSNPAV--------QSFWTFIANHRSQIDKVTWKSSVIDALTLLLPENVCKALEARGYPLGVEAKSEVTKGGKGELQLDIKGLASLYTLFTPRQLQLTATETALLKATQIFAGESPWI-----DFF
2	PROSPECT2	2i00A	0.096	0.832	1.397	threading_2	L-------TLKPVEEEHIDQFNELLSYVFQVTEADISKVFGWFHENQLISQIAIYPCGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWISYLFPY--NIPYYRRKGWEIMSDKLSFKI-------------RDTQLPKTVPVPGMIERLAVDH--PDVFDVYARFARQNERTAAVYYGANQEPLNQEARNGLWNFITAHVYWVKGDIYKN------EPLAFLLEDSQIKESIEPYVDVKAFLENVAEWNNGIFGLIWDEND-------------------------QVTITDEPLGTAVHLDIQTLTCLVMYRRPSYLHRITDKETLNSLERIFPDQEAYF----SDYF
3	SPARKS	3pnba	0.194	0.440	3.090	threading_3	------------------------------------------------------------------------------------------------------------------------------------------------MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRS-------------------------CGMTAIVKGLRTGTDFEYELQMAQMNKHIAG-VDTFFVATAP-----------RYSFVSSSLAKEVAMLGG--DVSELLPEPVNRRLRDRLN--------------
4	PROSPECT2	3r1kA	0.087	0.884	1.349	threading_4	V-------TLCSPTEDDWPGMFLLAAASFTDFIGPTDGAVVVRDGSEVVGMALYPGEVLSFVAVAPTHRRRGLLRAMCAELHRRIADSGYPVAALH--ASEGGIYGRFGYGPATTLHELTVDRRFARFH-------ADAPGGGLGGSSVRLVRPTEHRGEFEAIYERWRQQVPGGL---------LRPQVLWDELLAECKAAPGGYRVDRTDLARVSELRAVT-------------ADAHCALWRALIGLDSMERISIITHPQDPLPHLLTDTRVPAALEARGYAHEVGEFARCTPTDAAAEIMDRDVLGSLYGAHRASTLAAAKDSQLLRRLDAAFASDVPVQ---TAFEF
5	PPA-I	1od6A	0.226	0.440	1.961	threading_5	-------------------------------------------------------------------------------------------------------------------------------------------------MHVVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVL-ENQYLFSAEERLAIIREATAHLANVEAATFSG-------------------------LLVDFVRRVGAQAIVKGLRAVSDYEYELQMAHLNRQLY----------PGLETLFILA-ATRYSFVSSTMVKEIARYGG--DVSKLVPPATLRALKAKLGQ-------------
6	MUSTER	3gmiA	0.146	0.702	0.802	threading_6	-----------------------------------------------------------------------------QAMLIGEIMDL------------NLKNFLE----------DREEIIRDAKRKDEKSFKDFKKIRENKDKIVCDFTEYNPLHKGHKYALEKGKEHGIFISVLPERSGRYFLNRYIRAEMAIRAGADGPPMGIMGSGQYMRCLIKMFYSLYIPEKTMEKVIDCINKGYIQVKPYKIICIETGEILGEKLNYVIASMSQMIYKLNRE--GLKFNPKFVFVKR----LEGISGTKIREAIFSGKFEDIKNMLPKTTLSILKELYDNGKELILKRFEDRI
7	PROSPECT2	3gmiA	0.149	0.724	1.606	threading_7	-------------QAMLIGEIMDLNLK---------------------------------------------NFLEDREEIIRDAK------------RKDEKSFKD----------------------FKKIVEEIKE-RENKDKIVCDFTEYNPLHKGHKYALEKGKEHGIFISVLPGRGIPYFLNRYIRAEMAIRAGADGPPMGIMGSGQYMRCLIKMFYSLGIPEKTMEKVIDCINKGYIQVKPYKIICIETGEILGEKLNIDNYVIASMSQMIYKNREGLKFNPKFVFVKR----LEGISGTKIREAIFSGKFEDIKNMLPKTTLSILKELYDNGKEIKNSLPYGFS
8	HHPRED-l	3nd5_A	0.217	0.432	1.851	threading_8	-----------------------------------------------------------------------------------------------------------------------------------------------MRKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFI----LFTPEEKKYLIEEATKEMPNVRVIMQET------------------------QLTVESAKSLGANFLIRGIRNVKDYEYEKDIAKMNQHLAPEIETVFLLAEE-------P----YAHVSSSLLKEVLRFGG--DVSDYLPPNIYHALKQK----------------
9	HHPRED-g	2qjo_A	0.136	0.503	1.733	threading_9	------------------------------------------------------------------------------------------------------------------------------------------DPMQTKYQYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRRNPWRSPERMAMIEACLSPQKRVHFL----------TVRDWLYSDNLWLAAVQQ-----QVLKIT----GGSNSVVVLGHRKDASSYYLNLFPQWD--------YLETG-------HYPDFSSTAIRGAYFEGKEGDLD-KVPPAIADYLQTFQ--KSERYIAYKQAWA
10	SP3	3pnba	0.194	0.440	3.461	threading_10	------------------------------------------------------------------------------------------------------------------------------------------------MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRS-------------------------CGMTAIVKGLRTGTDFEYELQMAQMNKHIA-GVDTFFVATAP-----------RYSFVSSSLAKEVAMLGG--DVSELLPEPVNRRLRDRLN--------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.597 to 2ozgA SCOP code=d.106.1.4	TM-score=0.643 to 2i00C SCOP code=d.106.1.4	TM-score=0.702 to 1tfuA SCOP code=c.26.1.3	TM-score=0.477 to 2i00C SCOP code=d.106.1.4	TM-score=0.707 to 1od6A SCOP code=c.26.1.3