Template-based Modeling Results for PTQC_ECOLI

Submitted Primary Sequence

>Length 452
MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAMFVLINNVFLSFGEGSFFYSLGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFIGMALAEERKVDALAAGLLSVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVAEMFTFIVRRNWVIKLPDSVPASVSRSFSALIPGFIILSVMGIIAWALNTWGTNFHQIIMDTISTPLASLGSVVGWAYVIFVPLLWFFGIHGALALTALDNGIMTPWALENIATYQQYGSVEAALAAGKTFHIWAKPMLDSFIFLGGSGATLGLILAIFIASRRADYRQVAKLALPSGIFQINEPILFGLPIIMNPVMFIPFVLVQPILAAITLAAYYMGIIPPVTNIAPWTMPTGLGAFFNTNGSVAALLVALFNLGIATLIYLPFVVVANKAQNAIDKEESEEDIANALKF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAMFVLINNVFLSFGEGSFFYSLGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFIGMALAEERKVDALAAGLLSVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVAEMFTFIVRRNWVIKLPDSVPASVSRSFSALIPGFIILSVMGIIAWALNTWGTNFHQIIMDTISTPLASLGSVVGWAYVIFVPLLWFFGIHGALALTALDNGIMTPWALENIATYQQYGSVEAALAAGKTFHIWAKPMLDSFIFLGGSGATLGLILAIFIASRRADYRQVAKLALPSGIFQINEPILFGLPIIMNPVMFIPFVLVQPILAAITLAAYYMGIIPPVTNIAPWTMPTGLGAFFNTNGSVAALLVALFNLGIATLIYLPFVVVANKAQNAIDKEESEEDIANALKF
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEECHHHHHHHEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAMFVLINNVFLSFGEGSFFYSLGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFIGMALAEERKVDALAAGLLSVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVAEMFTFIVRRNWVIKLPDSVPASVSRSFSALIPGFIILSVMGIIAWALNTWGTNFHQIIMDTISTPLASLGSVVGWAYVIFVPLLWFFGIHGALALTALDNGIMTPWALENIATYQQYGSVEAALAAGKTFHIWAKPMLDSFIFLGGSGATLGLILAIFIASRRADYRQVAKLALPSGIFQINEPILFGLPIIMNPVMFIPFVLVQPILAAITLAAYYMGIIPPVTNIAPWTMPTGLGAFFNTNGSVAALLVALFNLGIATLIYLPFVVVANKAQNAIDKEESEEDIANALKF
44301200130001002201312001001200020000000000000011011211210001000010011012002002100010010000000000000001000232413200000000000011012212322221121111211000000000001000001322111212320121013001200000000000000000020102200200020001001211100000000000000001010110010001000100011001012210012001112311100021001000001000000000000001123210230010000000020210010001001101000000000000000000001001012012201100000000001010100000000000000000000001001211222133313322231234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAMFVLINNVFLSFGEGSFFYSLGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFIGMALAEERKVDALAAGLLSVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVAEMFTFIVRRNWVIKLPDSVPASVSRSFSALIPGFIILSVMGIIAWALNTWGTNFHQIIMDTISTPLASLGSVVGWAYVIFVPLLWFFGIHGALALTALDNGIMTPWALENIATYQQYGSVEAALAAGKTFHIWAKPMLDSFIFLGGSGATLGLILAIFIASRRADYRQVAKLALPSGIFQINEPILFGLPIIMNPVMFIPFVLVQPILAAITLAAYYMGIIPPVTNIAPWTMPTGLGAFFNTNGSVAALLVALFNLGIATLIYLPFVVVANKAQNAIDKEESEEDIANALKF
1	MUSTER	3qnqA	0.317	0.923	3.639	threading_1	-----RFLEKYVMPVAGKVAEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLPIPGYSEFMASLFG-----------KNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVLVDGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFEHTFGSIHNVVGKLLQEPLSILGASGAVIAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQAG---------QDVPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSAAVTWTTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEA----------
2	SPARKS	3qnqa	0.317	0.923	5.226	threading_2	-----RFLEKYVMPVAGKVAEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLPIPGYSEFMASL-----------FGKNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVAVDGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFETTFGSIHNVVGKLLQEPLSILGASLWVIAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQAG---------QDVPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARSGAAVTWTTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEA----------
3	PROSPECT2	3qnqA	0.324	0.923	4.263	threading_3	-----RFLEKYVMPVAGKVAEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLPIPGYSEFMASLFG-----------KNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVLVDGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFETTFGSIHNVVGKLLQEPLSILGASLWGAAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQ---------AGQDVPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSGAVTWTTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEA----------
4	PPA-I	3qnqA	0.317	0.923	5.888	threading_4	-----RFLEKYVMPVAGKVAEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLPIPGYSEFMASLFG-----------KNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVAVDGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFEHTFGSIHNVVGKLLQEPLSILGAWGAVIAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQAGQ---------DVPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSAAVTWTTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEA----------
5	HHPRED-l	3qnq_A	0.317	0.920	13.643	threading_5	-----RFLEKYVMPVAGKVAEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLPIPGYSEFMA------------SLFGNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVAGKGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFEHTFGSIHNVVGKLLQEPLSILGALWGVIAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQAG---------QDVPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSAAVTWTTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEA----------
6	HHPRED-g	3qnq_A	0.320	0.920	11.644	threading_6	-----RFLEKYVMPVAGKVAEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLPIPGYSEFMAS------------LFGNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVAPGGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFEHTFGSIHNVVGKLLQEPLSILGASLGAVAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQ---------AGQDVPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSAAVTWTTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGE---A-------
7	SP3	3qnqa	0.317	0.923	12.843	threading_7	-----RFLEKYVMPVAGKVAEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLPIPGYSEFMASL-----------FGKNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVAVDGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFETTFGSIHNVVGKLLQEPLSILGASLWVIAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQAG---------QDVPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSAAVTWTTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEA----------
8	SAM-T99	3qnqA	0.317	0.923	10.265	threading_8	-----RFLEKYVMPVAGKVAEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLPIPGYSEFMASLFG-----------KNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQILVDGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFETTFGSIHNVVGKLLQEPLSILGASLWGAVIILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQAGQD---------VPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPGAAVTWTTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEA----------
9	MUSTER	3qnqA2	0.299	0.451	1.762	threading_9	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLWGAVIAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQAG---------QDVPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSGAVTWTTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEA----------
10	SPARKS	1eu8a	0.093	0.832	0.738	threading_10	WKGVIAEFEKKRQATDTEQRRLDLVNALRGKSSDPDVFLMDVAWLGQFIASGWLEPLDDYVQKDNYDLSVFFQSVINLADKQGGKLYALPVYIDA--GLLYYRKDLLEKYGYSKPWQELVEMAQKIQSGERETNPNFWGFVWQGKQYEGLVCDFVEYVYSNGGSLGEFKDGKWV-PTLNKPENVEALQFMVDLI-----HKYKISPPNTYTEMTEEPVRLMFQ-----QGNAAFE----------------------RNWPYAWGLHNADDSPVKGKVGVAPLPHFPGHKSAATLGGWHIGISKYSDNKALAWEFVKFVESYSVQKGFAMNLGWNP----GRVDVYDD-----------------------PAVVSKSPHLKELRAVFENAVPRPIVPYYP---QLSEIIQKYVNSALAG-----------KISPQEALDKAQKEAEELVKQ

Predicted Tertiary Structure


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TM-score=0.383 to 1q90R SCOP code=f.23.12.1	TM-score=0.387 to 1q90R SCOP code=f.23.12.1	TM-score=0.389 to 1q90R SCOP code=f.23.12.1	TM-score=0.414 to 2aplA SCOP code=a.258.1.1	TM-score=0.388 to 1q90R SCOP code=f.23.12.1