Template-based Modeling Results for CHAA_ECOLI

Submitted Primary Sequence

>Length 366
MSNAQEAVKTRHKETSLIFPVLALVVLFLWGSSQTLPVVIAINLLALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTLMRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMALPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAHSSLWHAIWLIIHLIAVIAVTKMNASSLETLLDSMNAPVAFTGFLVALLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNELQFALGAPEMVVMVASLVLCHISFSTGRTNVLNGAAHLALFAAYLMTIFA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSNAQEAVKTRHKETSLIFPVLALVVLFLWGSSQTLPVVIAINLLALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTLMRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMALPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAHSSLWHAIWLIIHLIAVIAVTKMNASSLETLLDSMNAPVAFTGFLVALLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNELQFALGAPEMVVMVASLVLCHISFSTGRTNVLNGAAHLALFAAYLMTIFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSNAQEAVKTRHKETSLIFPVLALVVLFLWGSSQTLPVVIAINLLALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTLMRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMALPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAHSSLWHAIWLIIHLIAVIAVTKMNASSLETLLDSMNAPVAFTGFLVALLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNELQFALGAPEMVVMVASLVLCHISFSTGRTNVLNGAAHLALFAAYLMTIFA
552223112212310000000000000001112321021000000000000000100121021002311210100010000000000000011122321210011000000001000000000000023222110032002100000000000000001112223122110000000000000000011032231001121433233333332422221111000000000000000031112213210111400200000000001100300000110121202100000001000000100000100000112201000100100000000000100022021100100000000000000113
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSNAQEAVKTRHKETSLIFPVLALVVLFLWGSSQTLPVVIAINLLALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTLMRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMALPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAHSSLWHAIWLIIHLIAVIAVTKMNASSLETLLDSMNAPVAFTGFLVALLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNELQFALGAPEMVVMVASLVLCHISFSTGRTNVLNGAAHLALFAAYLMTIFA
1	SPARKS	2xwub	0.110	0.973	1.105	threading_1	LSNLYDKLGRLLTSYSWQHTEALLYGFQSIAETRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGNPELSVSSVSTLKKICREDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLE----KLAEEIPNPSNKLAIVHILGLLSNLFTTLDISHPNPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPEMLGRMYSTIPQALDLTRQLVHIFAHEPAHFPPIEALFLLVTSVTLTLFQQGPRDHPDIVDSFMQLLAQALKRKPDLFLCERLDVKAVFQCAVLALKFPE------APTVKASCGFFTELLPRC
2	PROSPECT2	1jdha	0.090	1.000	1.808	threading_2	LNDEDQVVEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLALVKMLFYAITTLHNLLLHQEGAKMAVRLAVKFLAITTDCLQILAYGNQESKLIILASGGPQALVLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLINVVTCAAGILSNLTCNNYKNKMMVCQVGGIERTVLRAGDREDITEPAICALRHLAEMAQNAVRLHYGLPVVVKLLPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQMEEIVEGCTGALHILARDVHNLYSPIENIQRVAAGVLAAEAIEAEGATAPLTELLHVATYAAAVLFRMS
3	PPA-I	3zuxA	0.078	0.842	1.219	threading_3	-----NILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCCPGGTASNVMTYLARG--------NVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVL-------------------GSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGL--PYDAQKALTIEVGMQNSGLAAALAAAHFAA-APVVAVPGALFSVWHNISGSLLATYWAAKA-----------------------
4	PROSPECT2	1xm9A	0.087	0.973	1.782	threading_4	GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFS----------GWCVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPFSSSMLNNIINLCRAARLLLSDMW
5	PPA-I	3g61A1	0.094	0.760	1.020	threading_5	NMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMIGWFDVHDVGELNTRLTDDVSKINEGIGDK-----IGMFFQAMATFFGGFIIGFT----------------RIGQVLTVFFSVLIGAFSVGQA-----------SPNIEAFANARGAAYEVFKIIDN---------------------KPSIDSFSGWQLTLLLLAIVPIIAIAGVVE----MKML------SGQALKDKKELEGSGKIATEAIENFRTREQKFETMYAQSLQIPYRNAMKKAHVFGITFS-----FTQAMMYFSYAACFRFGAYLVTQQLMT--------------------
6	PROSPECT2	1ejlI	0.077	0.992	1.740	threading_6	NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISL---LASPHAHISEQAVWALGNIAGDGSAFRDLVIGAIDPLLALLAVPDLSTLCGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQILSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIVYKASLNLIEFS
7	PROSPECT2	3a6pA1	0.078	0.984	1.697	threading_7	AMDQVNALRYRLEALKFCEEFKECVPCGLRLAEKTQVAIVRHFGLQILEHVLEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHWPDMLIELDETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWVSMSHITAENCKNEQELQLSRKGKLEDRKPLMVLFGDVAMHYILSAAQTADGG------GLVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTSTQMTWGALFRHEILSRDPLLLAIIPKYLRASMTNLVFDSDEDFNAFFNSSRAQQGEVMRLAC
8	PROSPECT2	1ee4a	0.058	0.984	1.691	threading_8	QELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNRTATWTLSNLCRGKKPQPDWSVVSQALPTLATLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITTEQIQAVIDANLIPPLVKLLEVAKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLERIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNENDKIY------EKAYKIIETYF
9	MUSTER	3a6pA	0.123	1.000	0.896	threading_9	QENVNKYQQVKKAQANCRVGVAALNTLAGYIDMSHITCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRLMVLFGDVAMHYILSAAQTADGGGLKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTQFLRSSTQMTWGALFRHEILSRDPLLLAIIPKYLRASMTNLVKMGFPSKSCEYSRFDFDSDEDFNAFFNSSRAQQGEVMRLACRLDPKTSFQMAGEWLKYQLSTFSLCSVFSPSFVQWEAMTLFLESVITQMFRTLNREEIPVNDGIELLQMVLNFPLILSCVLTNVSALFPFVTYPEFLPQVFSKLFSSVTFETVKAPRTRAVRNVRRHACSSIIKMC
10	SPARKS	1pw4a	0.118	0.945	0.967	threading_10	RLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVVEQGFSRGFALSGISIAYGFSKFIMGS----VSDRSNPRFLPAGLILAAAVMLFMGFVPWATS---SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLF--LLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV------FRGNRGATGVFFMTLVTIATIVYWM-----NPAGNPTVDMICMIVIGFLIYLAPKKAAGTAAGFTGLFGYLGGSVA

Predicted Tertiary Structure


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TM-score=0.414 to 2r2vA SCOP code=h.1.3.1	TM-score=0.621 to 1qgkA SCOP code=a.118.1.1	TM-score=0.680 to 1wa5B SCOP code=a.118.1.1	TM-score=0.417 to 2r2vA SCOP code=h.1.3.1	TM-score=0.416 to 2etsA SCOP code=a.24.26.1