Template-based Modeling Results for CDH_ECOLI

Submitted Primary Sequence

>Length 251
MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVRKQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGRYGLAMVRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEILR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVRKQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGRYGLAMVRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEILR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHCCCCCCCCEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEECHHHHCCCCHHHHHHHHCCCCHHHHHHEEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHCCCHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVRKQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGRYGLAMVRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEILR
44310110000000000000000130223301200300122011223233220200102332100002122110100000013131130120023211000010010011003312330233000000114212122100000000233013102322331223001011203212000110132212330001100230130332002000000213341000000212212223110220222103125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVRKQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGRYGLAMVRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEILR
1	MUSTER	2pofA	0.963	0.853	3.564	threading_1	------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQ-YLLPTYRINGTESPLLTDPSTPNFFWLAWQARDF-SKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPEARE-HGSYGLAVRQ-SDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
2	SPARKS	2pofa	0.972	0.853	7.337	threading_2	------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLL-PTYRINGTESPLLTDPSTPNFFWLAWQARD-FSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPEARE-HGSYGLAVR-QSDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
3	PROSPECT2	2pofA	0.972	0.853	4.281	threading_3	------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYL-LPTYRINGTESPLLTDPSTPNFFWLAWQARDF-SKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPEARE-HGSYGLAVR-QSDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
4	PPA-I	2pofA	0.963	0.853	8.924	threading_4	------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQ-YLLPTYRINGTESPLLTDPSTPNFFWLAWQARDF-SKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPEARE-HGSYGLAVRQ-SDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
5	HHPRED-l	2pof_A	0.991	0.853	12.908	threading_5	------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLL-PTYRINGTESPLLTDPSTPNFFWLAWQARDF-SKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPEAREH-GSYGLA-VRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
6	HHPRED-g	2pof_A	0.991	0.853	11.155	threading_6	------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLL-PTYRINGTESPLLTDPSTPNFFWLAWQARDF-SKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPEAREH-GSYGLA-VRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
7	SP3	2pofa	0.972	0.853	6.648	threading_7	------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLL-PTYRINGTESPLLTDPSTPNFFWLAWQARD-FSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPEARE-HGSYGLAVR-QSDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
8	SAM-T99	2pofA	0.967	0.853	9.813	threading_8	------------------------------SDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLL-PTYRINGTESPLLTDPSTPNFFWLAWQARDF-SKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPF--LAEEVPE-AREHGSYGLAV-RQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEIL-
9	MUSTER	1y23B	0.149	0.534	0.643	threading_9	---------------------------------------ENCIFCKIIAGDI-PSAKVYEDEHVLAFLDISTKGHTLVIPKTHIENVYE---FTDE---LAKQYFHAVPKIARAIRDEFEPIGLNTLNNNKAGQSVFHYHMHI---RYG--------GDGFGAVWKTHADDY----------KPEDLQN--ISSSIAKRLASS------------------------------------------------
10	SPARKS	3lb5a	0.149	0.482	0.962	threading_10	---------------------------AYDNNIFAKLIRNE-----------IPSVRVYEDDDVIAFMDIMAPGHTLVIPKKGSRNLLD------ADTETLFPVIKAVQKIAKAVKKAFQADGITVMQFAASQQTVYHLHFHIIPRMEGITEILEENAKKIRAAL--------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.922 to 2pofA SCOP code=d.13.1.4	TM-score=0.922 to 2pofA SCOP code=d.13.1.4	TM-score=0.923 to 2pofA SCOP code=d.13.1.4	TM-score=0.923 to 2pofA SCOP code=d.13.1.4	TM-score=0.922 to 2pofA SCOP code=d.13.1.4