Template-based Modeling Results for CDAR_ECOLI

Submitted Primary Sequence

>Length 385
MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER
CCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCHHHCCCHHHHHHHHHHCCCCEEEECHHHHHCCCCCCCEEEEEEECCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER
5412202231022002200400311000012302000001332122112001201232320101221032122133001010112010000000112232023102100100200111021112212112111100110021333232002103312031322100000102324222320121022012001222331000001121000011123222322132123102200220332131201000012121021003002101200100232133220000221101000220323111210020123132243212002001000322120210031010021001110210030021212203100100001112335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER
1	MUSTER	3onqA	0.162	0.642	1.208	threading_1	-------------------------------------------------------------------------------------------------------------------ADILDLLSGHTDDTTIERLAFECLLTNT---DDRVVSLNILGWQGDFNCFAIGGVPSAS------LASTSLAIRKAVRDLGGEHVVIGTYGTFLLALAC----QGAVTPEVTCTAVPAF--------SEDEPLYLSPVRSGVAGASHALRETFSLQAA-PALSTPSRPLRADELLPERALLG-DDYAREELYRNVYQVLRGENPDDPTYLTVSTFLKYGSSLENTAKELNVHPNTVRYRLKRAAETTGWDATDPRDAYVLTTALAIGRRR
2	PROSPECT2	1q2lA2	0.103	0.909	1.268	threading_2	FSLIKSEKK------------YDHPELIVDESNSLILRNPKAMDSARNQVMFALNDY---LAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQPQLFQALLEGYFQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSITLKKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRNKDVVVDKKQSVIFEKAGNSTDTGYDEYTSSAYSSLLGQIVQPRQWGMGFLLQSNDKQPSFLWERYKAFFPTAE--------------------AKLRAMKPDEFAQIQQAVITQMLQAPQTGEEASKLSKDFDRGNMRDKIVAQILLTPQKLADFFHQAGKAEYVHPEGWENVSALQQTMPLMSEK
3	HHPRED-g	2w1r_A	0.148	0.281	1.105	threading_3	--------DFAKEYADALYDSLGHSVLICDRDVYIAVSGSKDYLNSISEMLERTMDQRSSVLESDAKSVQLEDMNSYTVGPIVANGDPIGAVVIFSKDQTMGEVEKAVETAAGFLA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	PROSPECT2	1ykdA	0.104	0.800	1.260	threading_4	VTEVSHGQEMLQSITLKTGELLGADIFLLDEEKWSIVAAGEGDRSLEIGIAGEVATFKQVVNIPFQEKITGYRTYTMLALPLLSEQGRLVAVVQLFTSADEQLFQEFAPSIRLILSRSFYIATQKQRAAAAMMKAVKSLSQSSLDLEDTLKRVMDEAKELMNADRSTLWLIDRDRHEL--------------------WTKITQDNGSTKELRVPIGK--------------GFAGIVAASGQK---LNIPFDLYDHPDSATAKQIDQ------QNGYRTCSLLCM--------------------------PVFNGDQELIGVTQLVNKKKTGEFPPYNPETWPIAPECFRNDEEFMEAFN--------IQAGVALQAQLFATV
5	SPARKS	3onqa	0.146	0.642	1.113	threading_5	-------------------------------------------------------------------------------------------------------------------ADILDLLSGHTDDTTIERLAFECLLTNTD---DRVVSLNILGWQGDFNCFAIGGVPSAS------LASTSLAIRKAVRDLGGEHVVIGTYGTFLLALACQGAVT------------PEVTCTAVPAFSEDEPLYLSPVRSGVAGASHALRETF-SLQAAPALSTPSRPLRADELLPERALLG-DDYAREELYRNVYQVLRGENPDDPTYLTVSTFLKYGSSLENTAKELNVHPNTVRYRLKRAAETTGWDATDPRDAYVLTTALAIGRRD
6	HHPRED-g	1p0z_A	0.188	0.262	1.023	threading_6	EAVQKRDLARIKALIDPMRSFSDATITVGDASGQRLYHVNPDEIGKSMEGSDEALINAKSYVSVRKGS---LGSSLRGKSPIQDTGKVIGIVSVGYTIEQLEHH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	PROSPECT2	3onqA	0.150	0.642	2.191	threading_7	A-------------------------------------------------------------------------------------------------------------------DILDLLSGHTDDTTIERLAFECLLTNTD---DRVVSLNILGWQGDFNCFAIGGVPSAS------LASTSLAIRKAVRDLGGEHVVIGTYGTFLLALACQGAVT------------PEVTCTAVPAFSEDEPLYLSPVRSGVAGASHALRETFSLQAAPA-LSTPSRPLRADELLPERALLG-DDYAREELYRNVYQVLRGENPDDPTYLTVSTFLKYGSSLENTAKELNVHPNTVRYRLKRAAETTGWDATDPRDAYVLTTALAIGRDR
8	PROSPECT2	2au3A	0.079	0.792	1.245	threading_8	MSSDI--DELRREIVDVISEYLTPSFYVSPSKQIFKCFGCLYEDISYFEAALELAKRYGKKLDLEKISKD---------------------------EKVYVALDRVCDFYRESLLKNREASEYVKSRGIDPKVARKFDLGYAPSSEALVKVLKENDLDPRGRVIGFGGRRIVEDK-----------------------------SPKYINSPDSRVFKKGENLFGLYEAKEYIKEERLFSEGIRNVVAPLGTALTQNQANLLSAGRKAMKSAIPLLLSAGVEVYPEGYDPDEFIKEFGKEELRRLINS----------SGELFETLIKTARENLEEKTREFRYYLDGVRRFALASEFHTKYKVPME------------ILLMKI
9	PPA-I	3onqA	0.146	0.642	1.358	threading_9	-------------------------------------------------------------------------------------------------------------------ADILDLLSGHTDDTTIERLAFECLLTNTD---DRVVSLNILGWQGDFNCFAIGGVPSAS------LASTSLAIRKAVRDLGGEHVVIGTYGTFLLALACQGAVT------------PEVTCTAVPAFSEDEPLYLSPVRSGVAGASHALRETFSLQAAP-ALSTPSRPLRADELLPERALLG-DDYAREELYRNVYQVLRGENPDDPTYLTVSTFLKYGSSLENTAKELNVHPNTVRYRLKRAAETTGWDATDPRDAYVLTTALAIGRRD
10	HHPRED-l	3onq_A	0.163	0.636	6.675	threading_10	---------------------------------------------------------------------------------------------------------------ADI-L---DLLSGHTDD-TTIERLAFECLLTN-TDDRVVSL-NILGWQGDFNCFAIGGVPSA---S---LASTSLAIRKAVRDLGGEHVVIGTYGTFLLALACQ-GAVT------PEV----TCTAV-PAFSEDEPLYLSPVRSGVAGASHALRET-FSLQAAPALSTPSRPLRADELLPERALLGD-DYAREELYRNVYQVLRGENPDDPTYLTVSTFLKYGSSLENTAKELNVHPNTVRYRLKRAAETTGWDATDPRDAYVLTTALAIGR--

Predicted Tertiary Structure


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TM-score=0.429 to 1or7A SCOP code=a.4.13.2	TM-score=0.632 to 1q2lA SCOP code=d.185.1.1	TM-score=0.441 to 1vr6A SCOP code=c.1.10.4	TM-score=0.421 to 1vhmB SCOP code=d.110.2.1	TM-score=0.512 to 1vhmB SCOP code=d.110.2.1