Template-based Modeling Results for CCMF_ECOLI

Submitted Primary Sequence

>Length 647
MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAWLLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDIVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRDLNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIASLLSGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLGLAMACWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKPETVLYAEKRYYNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMALGGLLCLFDPRYRKRVSPQKTAPEAV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAWLLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDIVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRDLNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIASLLSGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLGLAMACWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKPETVLYAEKRYYNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMALGGLLCLFDPRYRKRVSPQKTAPEAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCEEEEEEEEEEECCCCEEEEEEEEEEEECCEEEEEEEEEHHHCCCCCCCCCHHHHHCCCCCCEEEECCEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAWLLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDIVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRDLNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIASLLSGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLGLAMACWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKPETVLYAEKRYYNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMALGGLLCLFDPRYRKRVSPQKTAPEAV
41111010000000000001000100011321220000010000000000000000000000021000000010132311110100000131200000000000000000010134122300010000000000000000011111012001301230330111021000000000000000000000000000001131222002001000000000000000000000022101100001001000000000000000001001222300200000000000000000000021010120101122222011000000000000000111223324242211110210000000000000000000000010003201311000111001100010000000000001104124331330121000000000000000011121312000000000000000000020022123123011110010000000000000000123221120010221210201402010210221223212011010101233221020101031132222210100010001200000001214311000000010001000000000000000000122222422334323434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAWLLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDIVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRDLNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIASLLSGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLGLAMACWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKPETVLYAEKRYYNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMALGGLLCLFDPRYRKRVSPQKTAPEAV
1	SPARKS	2xwub	0.102	0.875	1.330	threading_1	IPTDQ---------YESLKAQLFTQITRFASGS-------KIVLTRLCVALASLALSMMPDAWPCA-VADMVRLFQAPVD-------------GQGRCLALLELLTVLPEEFQTSRLPQYRKGLVRTSLAVCGAVFPLLEQLLQQPLKCFSSWVQLEVQDCEALIQAAFAALQDS-------ELFDSSVEAIVNAISQPRYVNTLLKLIPLVLGLQEQLRQAVQNG----------------DMETSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFSFEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFEQFRIYRVDISDTLMYVYEMLELLSNLYDKLGRLLTSYS-----------WQHTEALLYGFQSIAETID--VNYSDVVPGLIGLVQLADTVMFTIGSEWLADHPVMINSV---LPLVLHALGNPELSVSSVSTKKICRECKYDLPPYAANIVAVSQDVLMKQIHKTSQCMLSALQVEEILKN------LHSLISPYIQQLEKLAEEIPNPSNKLAIVHILGLLLDISHPNPVVVVLQQVFQLIQKVLSKWLNDAQVVEA------VCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQAS
2	PROSPECT2	1qgra	0.095	0.924	2.574	threading_2	MLITITFLVELSRVLAARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLHTLGTETACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETLFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILAAGVCLMLLATCCEDDIVPHVLPFIDTAAWTVGRICELLPEAAINDVYLAPGLSAEPRVASNVCWAFSSLAEAAYEAADVADTDRPDGHQNNLRSSAYESLMEIVKYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQMFSGGVQEDALMAVSTLVEVLFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIILENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEV-------------------------------------------------VLNTLQQASQAQVDKSDYDMVDYLNYTGIVQGLKGDQENVHFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHNQA
3	PPA-I	3dh4A	0.105	0.679	1.472	threading_3	LAIASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIP-----------------LMYSILGLALFALVYSIVVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDGVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGGLWVANLYYWYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYV-------ITSDPQLMASLAATNLPSAANADKAYPWLTQFLPVGVKGVVFAALAAAIVSSLAS------------------MLNSTATIFTMDIYKEYISPDSG-----------DHKLVNVGRTAAVVALIIACLIAPM------LGGIGQA---FQYIQEYTGLVSPGILAVFLLG--LFWKKTTSKGAIIGVVASIPFALFLKFM-----PLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPVTDRSFNIAAYGIMIVLAVLYTLFWVLYK-------------------------------------------------------------------------------------------------------------------------------------------
4	SPARKS	3afla	0.102	0.807	1.066	threading_4	GWAEFYEKSVEPWLERPVMPEPQPYPNNTRVATLWRQMYIDCQEVIYAIRHLAIAGRV----LGRDDLDASRK-------WLLAVAATKGATSRAYNDEAGFRVVVALAWGYDYDHLSEDERRTVRSVLLERTREVADHVIAHAR-----IHVFPYDSHAVRSLSAV---------------------LTPACIALQGESDGEWLDYTVEFLAT----------------LYSPWAGGGWA----EGPHYWMTGMAYLIEAANLIRSYIGYLYQRPFFQNTGRFPLYTKAPGTRRANFGDDSTLGDLPGLKLGYNVRQFAGVTGHYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQVEAVSPADLPALAVDIGWATIQKDMEDP-----DRHLQFVFKSSPYGSLSASHGDQN----------------AFVLYAHGEDLAI-----------------QSGYYVAFNSQMHLNWRRQTRSKN--AVLIGGKGQYAEKDKARIVSVEEQPGHVR--IVGDATAAYQVANPLVQKVLRETHFVNDSYFVIVDEVECLCHTLGAPQTGRSSFRYNGRKAGFYGQFVYSSGGTPQISAVEGF--------------------------PDIDPKEFEGLDI
5	PROSPECT2	2bkuB	0.085	0.923	2.466	threading_5	MTAEFAQLLENSILFLQFAGLSSQVLIDENTKLEGRILAKTQQFAQRWIAKNQIKTNALTALVSIIAAIADIELPHGAWPELMKIMVDNTGAEQPENVKRASLLALGYMCESADALVSSSNNILIAIVQGARLAALNALADSLIFIKNNMEREGERNYQAEDIEVQAAAFGCLCKIMSKYYKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPNRIDNEFNARASAFSALTTMVVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPLEKKDSAFIEDDVFYAISALAFSPYLLKALNQVDSPVSITAVGFIADISYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPY--------------------------------------------------LNDIMALCVAAQNTKPENGTLEALDYQIKDAYVGIVAGLHDKPEALFPYVGTIFQFIASRAAVGLIGDIAAMFPDGSIKQFYGQRSGQLSL
6	PPA-I	3ripA	0.079	0.728	1.358	threading_6	LHPSETSVLNRLCRLGTDYIRFTEFIEQYTGHGGLHGIYLRAFCTGLDSVLQPYRQALLDLE------QEFLGDPHLSISHVNYFLDQ------FQLLFPSVMVVVEQIKSQKIHGGLPPVRSALEKILAVCHGVMYKQLSA----WMLHGLLLDQHEEFFIKQGSLKQFSLRVEILYIP-VRVAEKILFVGESVQMFENNVNLTSILKNQEDTFAAELHRLKQ-------------QPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFI-----DTAQHMLKTPPTAVTEHDVNVAFQQSAHKVLLDDDNLLPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKHLKSNQTDAIKWRLRNHMAFLVDNLQYYLQVDVL--ESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHSFCSLVSQNLLDSILVKGFSRQSSLLFKILSSVRNHQIN-------------------------------------------------------------------------------------------------------------------------------------------
7	SPARKS	3m1ic	0.086	0.917	1.066	threading_7	LLP--------NDHRIGIRNFVVGMIISMCQDDEVFKT-QKNLINKSDLTLVQILKQEWPQNWPEF-IPELIGSSSS-------------SVNVCENNMIVLKLLSEEVFDFSAEQMTLHLKNSMSKEFEQIFKLCFQVLEQGSSSLLRYLHWIPYR------YIYETNILELLSTKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIAVTADLKATYANANG-----NDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEERELFKTTLDYWHNLVYEPLKKHIYEEICSQLRLVIIENMVRPEEVLEFVKESDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSMSEDTEKRFVVTVIKDLLDL----------TVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEEGVQDMACDTFIKIVQKQPRESEPFIQTIIRDIQKTT--------ADLQPQQVHTFEERSVAERNRLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQ--LGHIYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKTYISKARNLDDVVKVL
8	PROSPECT2	1wa5C	0.106	0.886	2.308	threading_8	MQDGFGLTLLHVSTRLAGALFFKNFIKRKLLPANNVELIKKEIVPLMIQIGEAISSIADSDFPDRWPLSDLASRLSNDDMVAHSIFKRWRPLFRSDELFLEIKLVLDVFTVDEQITANEKASLNILFDVLLVLIKLYYDFNCQDIPFHKYLSYSNPLLEHASVLIKVKSSIQELVQLYTPMINEFIQITWNLLTSISQPKYDILVSKSLSFLTAVTAMNNITEQIILPNVTLREEDVELFEDDPIEYIRRDRRRACTDFLKELKEKNEVLVTNIFLAHMKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFYVVYTYAAITIEKILTIRESNTSPAFIFHKEDEFLMRSIFRVLQTSLFPQLLAQFIEIVTIMAKNPSNYTQRQNLPLLVDSMMYVFQIIAFVVEQSATIPESIKPLAQPLIPAVTRLLKSFIKTDSSIFPDLVPVLGIFQRLGFDLLEHIMLLIDMNRLRQNSKTERYVKKLTVFFGLISNKLGSDFL-----------------------------------------------------------IHFIDEVQDGLFQQIWGNFIITTL---------------PTIGNLLDRKIALIGVLNMVISIIETASSQSIANLKNDYVEEISV
9	PPA-I	3zuxA	0.118	0.473	1.337	threading_9	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------NILSKISSFIGKTFSLWAALFAAAAFFAPDT----FKWAGPYIPWLLGIIMFGMGLTL-------------KPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLP-AEIAVGVILVGCCPGGTASNVMTYLARGNVAVAVTSVSTLTSPLLTPAIF----LMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDA-----LPLVSVAAIVLIIGAVVGASKGKIM----ESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGMQNSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA---------------------------------------------------------------------------------------------------------------------------------------------
10	SPARKS	2bkub	0.088	0.881	1.028	threading_10	NFLQFAGLSSQVLLEGRILAALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNQIKTNALTALVSIEIAAIADIPHGAWPELMKIMVDNTGAEQPENVKRASLLALGYMCESADALVSSSNNILIAIVQGAQSTETSKAVRLAANALADSLIFIKNNMERVCEATQAEIMSKYYTFM----KPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFDDWNVSMSAGACLQLFAQNC-GNHILEPVLEFVEQWRNREAAVMAFGSIMDKVQRTHQALPSILNLMNDQS---------LQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDGLIGAA------------NRIDNEFNARASAFSALTTMVEYATDTVA--------------ETSASISTFVMDKLGQTMSENQLTLEDAQSLQELQSNILTVLAAVIRKSPVADMLMGLEKKDSAFIEDDVFYISALAASLGKGFE------------KYLETFSPYLKALNQVDSPVSITAVG--FIADISNSLEEDFRRY-----------------------SDAMMNVLAQMISNPNARRELKPAVL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.360 to 2i13A SCOP code=k.12.1.1	TM-score=0.530 to 1m8xA SCOP code=a.118.1.8	TM-score=0.576 to 1qgkA SCOP code=a.118.1.1	TM-score=0.478 to 2q6hA SCOP code=f.54.1.1	TM-score=0.483 to 2q6hA SCOP code=f.54.1.1