Template-based Modeling Results for CCMC_ECOLI

Submitted Primary Sequence

>Length 245
MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFAPADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAVFTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAGILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTLMRMRNLILLMEKRRPWVSELILKRGRK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFAPADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAVFTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAGILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTLMRMRNLILLMEKRRPWVSELILKRGRK
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFAPADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAVFTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAGILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTLMRMRNLILLMEKRRPWVSELILKRGRK
20300041020220120001001000000000100010000010122133220000000000000000000000000000000221310100000001000000000000000102001010011101000000000000000001101223310010000000000000000100021012003111322321112100000000000000000000010011002123323101211233244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFAPADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAVFTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAGILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTLMRMRNLILLMEKRRPWVSELILKRGRK
1	SPARKS	2wyna	0.120	0.849	1.020	threading_1	SWVEDIATAK-----SNPNRPATEIYRDLRSAAASGWDFSSRWMPQQLNTLRTTSIV-------PVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKY---LW-NDQQGWYADYDLK-SHKVRNQLTAAALFPLYVNAAAKDRANKMATATKT-----------------HLLQPGGLNTTSVKSGWDAP---NGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDRE
2	PROSPECT2	3a0oA3	0.103	0.988	1.415	threading_2	GRSARHAWLNSEQLSAFADAVCGWAEFYEKSVEPWLERPVMPEPQPYPNNTRVATL---WRQMYIDCQEVIYAIRHLAIAGRVLGRDDLLDASRKWLDEAGFRVVVALAWGYDWLYDHLAHARIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLGMAYLIEAANLNTGRFPLYTKAPGTRRANFGDDSTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGNFDDLVYRHDYPQ
3	PPA-I	1pw4A2	0.125	0.849	1.411	threading_3	--------TAKQIFMQYVPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFAL----DKSSWAYFLYEYAGIPGTLLCGWM---SDKVFRGNRGATGVFFMTLVTIATIVY--WMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALEKKAAGTAAGFTGLFGYLGGSVAASAIVGY-------TVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP-------------
4	PROSPECT2	1r2fA	0.113	0.902	1.324	threading_4	IDDKDLEVTLSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEE---------AVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQIILAHYVS----------DEPLKKKIASVFLYSGFWLPMYFSSRGKL-TNTADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALVKAFLCYNANKALMNPAILAAL----SP
5	PPA-I	3am6A	0.090	0.816	1.187	threading_5	IAFGVAVHFRPLKSAYYINIAICTIAATAYYAMAVNY-------------QDLTMNGERQVVYARYIDWVLTTPLLLLDLIVMTKMGGVMISWVIGADIFMIVFGILGAFED-------EHKFKW--VYFIAGCVMQAVLTYGMYNATWKDDKSPEYHSSYVSLLVFLSILWVFYPVVW------AFGSGSGVLSVDNEAILMGILDVLAKPLFGMGCLIAHETIFKK-----------------
6	PROSPECT2	1ezfa	0.072	0.959	1.272	threading_6	NYKYLNQTSRDGEMRNAVCIFYLVLRALDTLELLHNFHSFLYQPDWRFMESKEKDLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDLGDFAKPENIDLAVQCLNELITNALHHIPDVITYLSRLR----------NQSVFNFCAIPQVMAIATLVKAIIYQYMEEIYHRIPDSKTRQIISTIRTQN
7	PPA-I	1t33A	0.128	0.702	1.187	threading_7	IAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIREL------ILLACKNMIMLLTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ-------------------------------------------------------------------
8	PROSPECT2	2bkuB2	0.110	0.927	1.265	threading_8	VMDKLGQTLTLEDAQSLQELQSNILTVLAAVILMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDIADISNSLEEDFRRYSDAMMNVLAQMISNP------NARRELKPAVLSVFGDIASNIGADFIKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHD------------KPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAFYGQDWVIDYIKRTRSG
9	PPA-I	3g61A1	0.089	0.873	1.114	threading_9	NMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWC-LAAG-----------RQIHKIRQKFFHAIMNQEIGWFDVHDVVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQ--------VLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDN-----------KPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVV
10	PROSPECT2	1kgna	0.119	0.922	1.250	threading_10	PDEKDLEVWDTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDAETMHEE---------AVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWSEENENLQRKAKIIMSYY----------NGDDPLKKKVASTLLFYSGFYLPMYLSSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDDLGWTEDVKRFLRYNANKALNNLGYE

Predicted Tertiary Structure


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TM-score=0.886 to 1pw4A SCOP code=f.38.1.1	TM-score=0.626 to 1v7vA SCOP code=a.102.1.4	TM-score=0.555 to 1j0nA SCOP code=a.102.3.2	TM-score=0.885 to 1pw4A SCOP code=f.38.1.1	TM-score=0.682 to 1uzrB SCOP code=a.25.1.2