Template-based Modeling Results for CCMB_ECOLI


  Submitted Primary Sequence

>Length 220
MMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQLLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWMVTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVLLSILVLPLTIPLLIFATAAMDAASMHLPVDGYLAILGALLAGTATLSPFATAAALRISIQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQLLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWMVTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVLLSILVLPLTIPLLIFATAAMDAASMHLPVDGYLAILGALLAGTATLSPFATAAALRISIQ
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQLLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWMVTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVLLSILVLPLTIPLLIFATAAMDAASMHLPVDGYLAILGALLAGTATLSPFATAAALRISIQ
2200110112010102322210100000000000011211222300030010000000000000002300221142000110100211110000010001001100010000100000000212001000000000000000000000000100220010000000100000000000001011231212010000000000000000000000121224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQLLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWMVTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVLLSILVLPLTIPLLIFATAAMDAASMHLPVDGYLAILGALLAGTATLSPFATAAALRISIQ
1SPARKS3lhqa0.1270.8951.108threading_1ETRQHILDVALRLFSQQGVSATS-----LAEIAN---AAGVTRGAIYWHFKN---KSDLFSEIW--ELSESNIGE--LEIEYQAKFPDDPLSVLREILVHILEATVTEERRRLLMEIIFHKCEFVGEMVVVQQAQRSLCLESYDRIEQTLKHCINAKMLLLTRRAAILMRSFISGLMENWLFAPQSFDLKKE-----ARAYVTILLEMYQLCPTLRA---
2PROSPECT22db0A0.0690.9271.197threading_2DIREALALEKILIMAKYDESVLKKLIEL----------LDDDLWTVVK------NAISIIMVIAKTREDLYEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPELVKMIPVLFANYRIGKINVSYALEEIAKANPMLMASIVRDFMSMLSSKNREDKLTALNFENSFKYVNPFLPRIINLLHDGDEIVRASAVEALVHLRKVVIKRTVKEGIRLLLL
3PPA-I1t33A0.0980.7911.068threading_3------------------------------------MNIPTTTTKGEQAKSQLIAAALAQFGEYGL---------HATTRDIAALGQNLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYT-GCDANDTRMILHTHALLGEVLAFRLGKETILLRTG
4SPARKS2uxha0.1070.8501.035threading_4ETRAQIIEAAERAFYKR----------------------GVAADIAELAGVT---RGAIYWHFNNKAELVQALLDSLHARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLLDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGD-----VEKWVDTGLDMLRLSPALRK---
5PROSPECT21ejlI0.1321.0001.178threading_5ESQLQATQAARKLLSREKQPPIDNIIQFESAWALTNIASGTSEQTKAVVDGGAIAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLDSCWAISYLTDGPNERIEMVVLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVQVILDAISNIFQ
6SPARKS2gena0.1240.8051.007threading_6-------RKDEILQA-----ALACFSEH-----------GVDIEIRDRSGAS---IGSLYHHFGNKERIHGELYLA-GIGQYAAL---LEAGFAEETVRLLVTSYIDWVVANPDWARFILHSRGRVEAGELGERLRADNQAHFARIHAALAGYRAEGLFEPDDCFASVVIGPAHDLARQWLAGRTRVALADCRELLAQVAWDSVR------AA-------
7PROSPECT21w63A10.1160.9821.171threading_7MEMIQKECAAIRSSFREEDNTYRCRNVAKLLYMH---MLGYPAHFGQLECLKLIIGYLGAMLLLDERQDVHLLMTN-CIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRLYETVLTIMDIK
8PROSPECT23b2aA0.1180.9641.163threading_8ISKTEL--RELVLSWQILDAVSLALEDKRALFLILELAGEDDETTRLRA------FVALGEILKRADSDLRMMVLERHLDVFLVKDVPMGSKTFLKAAKTLVSLMMRIETIDVLSKLQPLEDSKLVRTYINELVVSPDLYTKVAGFCLFLNMLNSSADSGHLTLILDEIPSLLELALDVLEKALSFPLLENVKIELLKISRIVDGLVYRKVSDLIDSVIS
9PROSPECT21oyzA0.0550.9951.160threading_9YGLYNQCKDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFN-ILNNALNDKSACVRATAIESTAQRCKKNPIYSKIVEQSQITAFDKSTNVRRATAFAISVIATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVIEAIIGLSYRKDKRVLSVLCDELDIIEAAGELGDKTLLPVLDT
10MUSTER1pw4A20.1330.8550.850threading_10IFMQYVLPKLLWYIA-----IANVFVYLLRYGILDPTYLHFALDKSSWAY-FLYEYAGIPGTLLCSDKVF-----RGN---------------------RGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGFMVMIGGSILAVILLIVVMIGEKRRHELQ

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.901 to 1pw4A
SCOP code=f.38.1.1
TM-score=0.765 to 1vi0A
SCOP code=a.4.1.9
TM-score=0.595 to 1b3uA
SCOP code=a.118.1.2
TM-score=0.757 to 1t33A
SCOP code=a.4.1.9
TM-score=0.660 to 1rktA
SCOP code=a.4.1.9